Protein–RNA interactions for Protein: Q6PFD9

Nup98, Nuclear pore complex protein Nup98-Nup96, mousemouse

Known RBP Predictions only

Length 1,816 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup98Q6PFD9 Gm6439-201ENSMUST00000199849 862 ntBASIC13.12□□□□□ -0.31
Nup98Q6PFD9 AC158388.3-202ENSMUST00000225517 775 ntBASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Ggta1-201ENSMUST00000044255 1221 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Cstb-201ENSMUST00000005185 603 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Nkg7-201ENSMUST00000070518 881 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Olfr60-201ENSMUST00000075470 936 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Kcnma1-207ENSMUST00000172099 3354 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Gm2238-201ENSMUST00000192074 3669 ntBASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Rab11fip4os1-201ENSMUST00000145652 2187 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Gm26908-201ENSMUST00000181856 1637 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 AC151836.1-201ENSMUST00000228730 1637 ntBASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Pom121l2-201ENSMUST00000017126 2960 ntAPPRIS P4 BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Ccr6-205ENSMUST00000177568 1334 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Gm26703-201ENSMUST00000181370 2864 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Nup98Q6PFD9 Fyttd1-211ENSMUST00000171325 4295 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Hemk1-201ENSMUST00000035196 2192 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 F730043M19Rik-204ENSMUST00000148740 3312 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Cd19-201ENSMUST00000032968 2432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm16518-201ENSMUST00000117960 508 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Tspan32os-201ENSMUST00000131740 975 ntTSL 2 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm12056-201ENSMUST00000148364 1257 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Ppy-202ENSMUST00000170554 487 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm27316-201ENSMUST00000184884 277 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm31557-201ENSMUST00000213825 973 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm31557-202ENSMUST00000213995 722 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 AC156790.2-201ENSMUST00000227115 568 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Pced1b-204ENSMUST00000228521 1790 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Atp6v0e2-201ENSMUST00000040361 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Tcirg1-204ENSMUST00000126070 3041 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 AC156631.1-201ENSMUST00000215213 1358 ntTSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Nek3-204ENSMUST00000178324 1989 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gpat3-202ENSMUST00000092990 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm16677-201ENSMUST00000181229 2174 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm27174-201ENSMUST00000184493 2174 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Maats1-201ENSMUST00000023501 2750 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Olfr434-203ENSMUST00000216562 1318 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Eef1b2-204ENSMUST00000129339 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm23745-201ENSMUST00000104230 125 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 1700071K01Rik-201ENSMUST00000117522 819 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm26368-201ENSMUST00000157826 118 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm8601-201ENSMUST00000182096 909 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm19918-201ENSMUST00000194858 400 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm43401-201ENSMUST00000198829 394 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm7192-201ENSMUST00000210793 1137 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm26782-203ENSMUST00000227103 751 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Gm37264-201ENSMUST00000194916 2192 ntBASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Stx7-205ENSMUST00000220041 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Nup98Q6PFD9 Nop14-201ENSMUST00000041364 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Cdc20b-204ENSMUST00000181568 1494 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Osbp2-201ENSMUST00000070552 4097 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Samd13-202ENSMUST00000125965 1590 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Tram1l1-201ENSMUST00000058994 3889 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Serpinb6a-203ENSMUST00000076532 1504 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 4930579F01Rik-201ENSMUST00000012186 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Serhl-205ENSMUST00000166427 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gm6441-201ENSMUST00000120983 696 ntBASIC13.1□□□□□ -0.31
Nup98Q6PFD9 4930502E09Rik-201ENSMUST00000126016 755 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gm25872-201ENSMUST00000177784 100 ntBASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Gm7069-201ENSMUST00000182418 1008 ntBASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Tmprss11c-202ENSMUST00000196462 1257 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Lsm8-204ENSMUST00000201141 503 ntTSL 3 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 AC167364.1-201ENSMUST00000221495 784 ntTSL 5 BASIC13.1□□□□□ -0.31
Nup98Q6PFD9 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms