Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 Anp32-ps-201ENSMUST00000118265 388 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm16209-201ENSMUST00000118457 627 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm13754-201ENSMUST00000120486 998 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm10171-201ENSMUST00000126220 628 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm15912-201ENSMUST00000128914 578 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm17219-201ENSMUST00000168439 593 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm9372-201ENSMUST00000168454 430 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm26914-201ENSMUST00000182262 223 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm18529-201ENSMUST00000193025 1257 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gpx1-204ENSMUST00000193987 653 ntTSL 3 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm38301-201ENSMUST00000195573 543 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Fxyd2-211ENSMUST00000216289 668 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Ube2dnl1-201ENSMUST00000059509 743 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Speer4f1-201ENSMUST00000076099 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm23458-201ENSMUST00000083257 169 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm10233-201ENSMUST00000089275 628 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Gm7061-201ENSMUST00000118127 1416 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Tnfrsf22-204ENSMUST00000171066 1780 ntBASIC11.59□□□□□ -0.55
Col9a1Q05722 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Slc25a17-201ENSMUST00000023040 1667 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Col9a1Q05722 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC11.59□□□□□ -0.55
Col9a1Q05722 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Col9a1Q05722 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Col9a1Q05722 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gpr33-201ENSMUST00000040161 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Cd300ld5-201ENSMUST00000100239 852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Cd300ld4-201ENSMUST00000100240 852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm1826-201ENSMUST00000118646 1162 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Coa4-202ENSMUST00000120454 742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC11.58□□□□□ -0.56
Col9a1Q05722 D730045A05Rik-201ENSMUST00000159260 1269 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Csta1-202ENSMUST00000161638 422 ntTSL 3 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Ppp1r2-ps1-201ENSMUST00000178232 621 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Ppp1r2-ps6-201ENSMUST00000179333 621 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 6530411M01Rik-201ENSMUST00000181618 1033 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm27001-201ENSMUST00000182252 936 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm5946-201ENSMUST00000182340 970 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm42751-201ENSMUST00000198065 559 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Vmn1r-ps6-201ENSMUST00000201079 934 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm6108-201ENSMUST00000208365 367 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 AC166902.2-201ENSMUST00000215193 837 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 AC102312.1-202ENSMUST00000218600 851 ntTSL 2 BASIC11.58□□□□□ -0.56
Col9a1Q05722 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC11.58□□□□□ -0.56
Col9a1Q05722 CT030166.5-201ENSMUST00000222249 420 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 AC164978.2-201ENSMUST00000226645 857 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 AC159006.3-201ENSMUST00000226918 664 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Rida-201ENSMUST00000022946 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Mcee-201ENSMUST00000037205 828 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Fxyd1-201ENSMUST00000039909 620 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Olfr1178-201ENSMUST00000075640 972 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Cd300ld3-201ENSMUST00000092459 852 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm43858-201ENSMUST00000199418 1778 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Lrrc3b-203ENSMUST00000223700 1426 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Mrgprg-201ENSMUST00000058092 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.58□□□□□ -0.56
Col9a1Q05722 Ccndbp1-201ENSMUST00000060455 1569 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col9a1Q05722 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC11.58□□□□□ -0.56
Col9a1Q05722 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms