Protein–RNA interactions for Protein: Q03958

Pfdn6, Prefoldin subunit 6, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn6Q03958 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.4□□□□□ -0.58
Pfdn6Q03958 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Fbxl18-202ENSMUST00000110766 7857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC11.4□□□□□ -0.58
Pfdn6Q03958 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn6Q03958 Nt5dc2-206ENSMUST00000227794 1858 ntAPPRIS ALT2 BASIC11.4□□□□□ -0.59
Pfdn6Q03958 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Pfdn6Q03958 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.59
Pfdn6Q03958 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.59
Pfdn6Q03958 Zfp189-202ENSMUST00000107696 2965 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn6Q03958 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn6Q03958 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
Pfdn6Q03958 D130017N08Rik-203ENSMUST00000196629 2265 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm43931-201ENSMUST00000204817 2870 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Zbtb42-201ENSMUST00000169593 3478 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm12247-201ENSMUST00000117585 670 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm13809-201ENSMUST00000117921 597 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm12463-201ENSMUST00000118271 849 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm13326-201ENSMUST00000118730 1011 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm7150-201ENSMUST00000122032 981 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Endov-204ENSMUST00000129327 1184 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 C230038L03Rik-202ENSMUST00000136294 1197 ntTSL 2 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm13523-201ENSMUST00000151820 488 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm24990-201ENSMUST00000157406 323 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Trub2-210ENSMUST00000177467 744 ntTSL 3 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm5733-201ENSMUST00000190232 939 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm5363-201ENSMUST00000211927 938 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Abhd14a-201ENSMUST00000048685 1256 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Inpp4a-206ENSMUST00000132615 3038 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Dido1-204ENSMUST00000103055 4613 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Myo18a-208ENSMUST00000108375 7513 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm45272-203ENSMUST00000211111 1693 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Pla2g7-201ENSMUST00000024706 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Cbfa2t2-204ENSMUST00000109725 6080 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Flna-202ENSMUST00000101454 8345 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
Pfdn6Q03958 Erich3-203ENSMUST00000189969 3460 ntBASIC11.39□□□□□ -0.59
Pfdn6Q03958 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 8430408G22Rik-202ENSMUST00000178241 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 BC024139-202ENSMUST00000089654 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Vmn1r45-201ENSMUST00000054202 3341 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Rbm8a-203ENSMUST00000198027 2757 ntTSL 3 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm7642-201ENSMUST00000216345 1809 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Foxn4-201ENSMUST00000044790 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Kcnk18-201ENSMUST00000065204 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm5795-201ENSMUST00000100920 984 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm15515-201ENSMUST00000117827 822 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm3150-201ENSMUST00000166418 204 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm3685-201ENSMUST00000169215 984 ntAPPRIS P5 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm27552-201ENSMUST00000183351 62 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm27341-201ENSMUST00000183570 106 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm27844-201ENSMUST00000183613 62 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm42682-201ENSMUST00000198349 1265 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Fxyd4-203ENSMUST00000203082 815 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Bpifa1-201ENSMUST00000028985 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm9774-201ENSMUST00000047300 1064 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm10338-201ENSMUST00000096148 984 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Nr2f2-202ENSMUST00000089565 1664 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.38□□□□□ -0.59
Pfdn6Q03958 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Gm4409-201ENSMUST00000130734 1919 ntTSL 2 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Capn15-204ENSMUST00000212149 4555 ntAPPRIS P3 TSL 5 BASIC11.38□□□□□ -0.59
Pfdn6Q03958 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms