Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Rgs6-211ENSMUST00000191107 1621 ntTSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Gm17029-203ENSMUST00000153443 2758 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Bpnt1-201ENSMUST00000027916 2200 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 4933438K21Rik-201ENSMUST00000175787 1693 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Nkx3-2P97503 Cep128-210ENSMUST00000141429 4807 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Grm1-202ENSMUST00000105560 4265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm29100-201ENSMUST00000187564 4410 ntBASIC10.75□□□□□ -0.69
Nkx3-2P97503 Arhgap20-204ENSMUST00000130405 3881 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Sorcs1-202ENSMUST00000111756 3617 ntAPPRIS ALT1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Sorcs1-207ENSMUST00000211008 3617 ntAPPRIS ALT1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Mtmr11-201ENSMUST00000054356 2778 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Cdh18-204ENSMUST00000165614 2162 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm4294-201ENSMUST00000105169 614 ntBASIC10.75□□□□□ -0.69
Nkx3-2P97503 Derl2-202ENSMUST00000108523 884 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm1848-201ENSMUST00000120711 789 ntBASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm11960-201ENSMUST00000122068 925 ntBASIC10.75□□□□□ -0.69
Nkx3-2P97503 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm42791-202ENSMUST00000147473 727 ntAPPRIS P1 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 B230119M05Rik-201ENSMUST00000154072 979 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Tmem242-203ENSMUST00000188282 822 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm17590-202ENSMUST00000197881 1232 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Abhd4-208ENSMUST00000199338 868 ntTSL 3 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Myl6-211ENSMUST00000219236 692 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Cplx3-201ENSMUST00000045068 2859 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Tenm3-201ENSMUST00000033965 8961 ntAPPRIS P3 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Gdpd5-208ENSMUST00000213887 2711 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Ripor1-201ENSMUST00000043531 4108 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Plekha6-203ENSMUST00000186917 4820 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Atp8a2-202ENSMUST00000131670 1725 ntTSL 2 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Stom-201ENSMUST00000028241 2787 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 P2ry1-201ENSMUST00000029331 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Sass6-204ENSMUST00000197335 2458 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Pou1f1-201ENSMUST00000004964 1773 ntTSL 5 BASIC10.75□□□□□ -0.69
Nkx3-2P97503 Pcgf3-201ENSMUST00000046975 7708 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Map4-203ENSMUST00000163979 3320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm8378-202ENSMUST00000167777 2624 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm38089-201ENSMUST00000193585 1514 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 Fggy-201ENSMUST00000043335 1910 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Prex1-202ENSMUST00000099080 5818 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Fbxl22-201ENSMUST00000056890 3935 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm16166-201ENSMUST00000118291 787 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 4930538E20Rik-202ENSMUST00000146717 497 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm8194-201ENSMUST00000159783 859 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm5778-201ENSMUST00000171003 1072 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm18159-201ENSMUST00000174516 1070 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm23153-201ENSMUST00000175323 313 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm7137-201ENSMUST00000180161 711 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm2875-201ENSMUST00000211333 360 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 AC134328.1-201ENSMUST00000222693 667 ntTSL 2 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 CT573047.1-201ENSMUST00000223652 851 ntBASIC10.74□□□□□ -0.69
Nkx3-2P97503 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Olfr284-201ENSMUST00000063289 918 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Sgk1-213ENSMUST00000164659 2602 ntTSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Ifi47-202ENSMUST00000109202 1773 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Ikzf4-203ENSMUST00000221150 2213 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Gm43064-201ENSMUST00000199710 3144 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Lvrn-201ENSMUST00000025358 3219 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Nkx3-2P97503 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 89.8 ms