Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm12951-201ENSMUST00000150216 434 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm17391-201ENSMUST00000171036 126 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Gm44421-201ENSMUST00000205064 1221 ntBASIC10.17□□□□□ -0.78
SgcbP82349 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC10.17□□□□□ -0.78
SgcbP82349 Gm18974-201ENSMUST00000221478 1031 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Gm6722-201ENSMUST00000221586 390 ntBASIC10.17□□□□□ -0.78
SgcbP82349 CT030170.2-201ENSMUST00000223267 126 ntBASIC10.17□□□□□ -0.78
SgcbP82349 AC135469.1-201ENSMUST00000225984 772 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.17□□□□□ -0.78
SgcbP82349 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC10.17□□□□□ -0.78
SgcbP82349 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 BC061237-201ENSMUST00000096899 899 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Gm10702-201ENSMUST00000098929 1268 ntBASIC10.17□□□□□ -0.78
SgcbP82349 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Tro-203ENSMUST00000112709 6610 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Prx-201ENSMUST00000065487 4497 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Nrf1-220ENSMUST00000170535 1527 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Rin1-201ENSMUST00000025818 4184 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Rnf43-203ENSMUST00000121782 2640 ntTSL 5 BASIC10.17□□□□□ -0.78
SgcbP82349 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
SgcbP82349 Gm18642-201ENSMUST00000206642 1400 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm37105-201ENSMUST00000192251 2085 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 AC158355.1-201ENSMUST00000215895 1705 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Fdxacb1-201ENSMUST00000042391 2658 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
SgcbP82349 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm12029-201ENSMUST00000120073 832 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm15329-201ENSMUST00000121408 155 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm13299-201ENSMUST00000133644 425 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gm15985-201ENSMUST00000137731 343 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcbP82349 2610005L07Rik-201ENSMUST00000139264 948 ntBASIC10.16□□□□□ -0.78
SgcbP82349 E130307A14Rik-204ENSMUST00000139356 701 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcbP82349 Gm13307-202ENSMUST00000142990 425 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcbP82349 Cideb-201ENSMUST00000001497 1212 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC10.16□□□□□ -0.78
SgcbP82349 Gm3329-201ENSMUST00000159873 556 ntBASIC10.16□□□□□ -0.78
SgcbP82349 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC10.16□□□□□ -0.78
SgcbP82349 Wdr53-204ENSMUST00000178573 1153 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Gm21092-201ENSMUST00000178995 955 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm5523-201ENSMUST00000180415 997 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Gm3551-201ENSMUST00000190750 664 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 9430092D12Rik-201ENSMUST00000194937 1274 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm42919-201ENSMUST00000197753 1284 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm44315-201ENSMUST00000203041 219 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Gm45770-201ENSMUST00000212105 616 ntBASIC10.16□□□□□ -0.78
SgcbP82349 AC164105.2-201ENSMUST00000215484 524 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gm6653-201ENSMUST00000218063 1288 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Prl7a1-203ENSMUST00000224852 1283 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Prl7a1-201ENSMUST00000006659 940 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gm10179-201ENSMUST00000086233 688 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Olfr584-201ENSMUST00000098210 964 ntBASIC10.16□□□□□ -0.78
SgcbP82349 Edaradd-201ENSMUST00000179308 6668 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Fcer2a-201ENSMUST00000005678 2242 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Flywch1-201ENSMUST00000045517 2798 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Kat6b-201ENSMUST00000069648 7649 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Pknox1-206ENSMUST00000176701 4232 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Gria4-202ENSMUST00000063508 5352 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Rab27b-201ENSMUST00000069749 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Pigo-201ENSMUST00000067481 3525 ntAPPRIS ALT2 TSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Platr25-207ENSMUST00000222477 1705 ntTSL 5 BASIC10.16□□□□□ -0.78
SgcbP82349 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC10.16□□□□□ -0.78
SgcbP82349 Pofut1-207ENSMUST00000152390 4833 ntTSL 2 BASIC10.16□□□□□ -0.78
SgcbP82349 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC10.15□□□□□ -0.78
SgcbP82349 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.15□□□□□ -0.78
SgcbP82349 Zmynd8-205ENSMUST00000109266 5072 ntAPPRIS P4 TSL 1 (best) BASIC10.15□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms