Protein–RNA interactions for Protein: P62960

Ybx1, Nuclease-sensitive element-binding protein 1, mousemouse

Known RBP Predictions only

Length 322 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ybx1P62960 Gtf2ird1-203ENSMUST00000100650 3487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ybx1P62960 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Ybx1P62960 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm18210-201ENSMUST00000209001 1524 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Cast-212ENSMUST00000223309 1529 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Sik2-205ENSMUST00000176663 4107 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Dglucy-202ENSMUST00000110069 3058 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 1500002C15Rik-201ENSMUST00000178987 2183 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Ntng2-202ENSMUST00000071201 1881 ntTSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm3755-201ENSMUST00000169555 1462 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ybx1P62960 Art5-203ENSMUST00000106935 495 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm9133-201ENSMUST00000118289 540 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm12943-201ENSMUST00000119616 210 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Gm15620-201ENSMUST00000122949 270 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm25343-201ENSMUST00000157460 107 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Gm17214-201ENSMUST00000164501 541 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 B230110C06Rik-201ENSMUST00000181388 1274 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Mmp7-201ENSMUST00000018767 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm42430-201ENSMUST00000197209 616 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm45856-201ENSMUST00000212752 416 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 AC153891.1-201ENSMUST00000213761 742 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm9487-201ENSMUST00000216600 472 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 AC112146.1-201ENSMUST00000221641 733 ntTSL 3 BASIC11.6□□□□□ -0.55
Ybx1P62960 Olfr61-201ENSMUST00000084455 936 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ybx1P62960 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Ephx3-201ENSMUST00000087721 2416 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ybx1P62960 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Ybx1P62960 Syt15-202ENSMUST00000119693 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Telo2-202ENSMUST00000115181 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Gm44573-201ENSMUST00000191753 2370 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Gm5171-201ENSMUST00000214944 1415 ntBASIC11.6□□□□□ -0.55
Ybx1P62960 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Ybx1P62960 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Ybx1P62960 Rufy2-204ENSMUST00000131718 2816 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Clec16a-201ENSMUST00000038145 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
Ybx1P62960 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC11.59□□□□□ -0.55
Ybx1P62960 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Katnal2-207ENSMUST00000137354 1482 ntTSL 5 BASIC11.59□□□□□ -0.55
Ybx1P62960 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Clec10a-201ENSMUST00000000327 1454 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Dnmt3aos-201ENSMUST00000144896 1385 ntTSL 2 BASIC11.59□□□□□ -0.55
Ybx1P62960 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm12712-201ENSMUST00000120676 801 ntBASIC11.59□□□□□ -0.55
Ybx1P62960 Gm13376-201ENSMUST00000128743 448 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm22846-201ENSMUST00000157706 270 ntBASIC11.59□□□□□ -0.55
Ybx1P62960 Mir7035-201ENSMUST00000184713 82 ntBASIC11.59□□□□□ -0.55
Ybx1P62960 Gm28901-201ENSMUST00000188810 474 ntTSL 5 BASIC11.59□□□□□ -0.55
Ybx1P62960 1700088E04Rik-211ENSMUST00000190730 691 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm37852-201ENSMUST00000193027 350 ntBASIC11.59□□□□□ -0.55
Ybx1P62960 Tmbim7-204ENSMUST00000198739 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Krtap4-1-201ENSMUST00000081007 1015 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ybx1P62960 Mok-203ENSMUST00000084974 1132 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Myl9-201ENSMUST00000088552 1128 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Ybx1P62960 Tyk2-206ENSMUST00000216874 4828 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 CT010447.1-201ENSMUST00000225657 1608 ntBASIC11.59□□□□□ -0.55
Ybx1P62960 Vill-202ENSMUST00000074734 2440 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Ybx1P62960 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms