Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Gm17221-201ENSMUST00000163909 481 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm17214-201ENSMUST00000164501 541 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm5529-201ENSMUST00000165691 891 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm17073-201ENSMUST00000168069 556 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm18201-201ENSMUST00000174735 875 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Ly6l-201ENSMUST00000177479 430 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Lmo4P61969 Mir7035-201ENSMUST00000184713 82 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm28529-201ENSMUST00000186159 387 ntTSL 3 BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm5700-201ENSMUST00000191483 989 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm18035-201ENSMUST00000211962 589 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 E230014E18Rik-201ENSMUST00000215920 859 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm9487-201ENSMUST00000216600 472 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 E2f8-202ENSMUST00000119223 3499 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Usp13-201ENSMUST00000072312 7580 ntAPPRIS P2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm42499-201ENSMUST00000196193 1412 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Arl6ip5-201ENSMUST00000044681 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm14005-209ENSMUST00000224993 1832 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Jak3-203ENSMUST00000110013 4009 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Pdxdc1-201ENSMUST00000023361 4228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Lrp2bp-201ENSMUST00000066451 1525 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 AC113282.1-201ENSMUST00000225278 1707 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Lmo4P61969 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 1700125H20Rik-202ENSMUST00000100681 687 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Art5-202ENSMUST00000106934 843 ntTSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Cdc42se1-203ENSMUST00000107200 637 ntTSL 3 BASIC9.12□□□□□ -0.95
Lmo4P61969 Rfc4-202ENSMUST00000115337 416 ntTSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm5257-201ENSMUST00000121823 790 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Mrgpra2a-201ENSMUST00000159004 1240 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm3233-201ENSMUST00000168997 693 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Lmo4P61969 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Malat1-205ENSMUST00000174808 656 ntTSL 2 BASIC9.12□□□□□ -0.95
Lmo4P61969 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Gm19927-201ENSMUST00000185792 781 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 C630004L07Rik-201ENSMUST00000193236 1275 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 4930557B06Rik-201ENSMUST00000200193 381 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Gm18706-201ENSMUST00000210053 1066 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Gm30978-201ENSMUST00000211581 1066 ntTSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm45500-201ENSMUST00000211676 803 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Tnfsf9-201ENSMUST00000039490 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm8325-201ENSMUST00000099086 453 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Gm44806-201ENSMUST00000205574 2303 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Fkbp15-203ENSMUST00000098033 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gapdhs-203ENSMUST00000182634 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Bcat2-208ENSMUST00000211173 1684 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Slc22a4-201ENSMUST00000020586 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Coa5-201ENSMUST00000027286 3863 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC9.12□□□□□ -0.95
Lmo4P61969 AC155245.1-201ENSMUST00000222266 1804 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Cinp-201ENSMUST00000043716 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Inip-201ENSMUST00000095063 3237 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Plekha7-202ENSMUST00000181981 4633 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Ercc2-201ENSMUST00000062831 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm44663-201ENSMUST00000206898 3150 ntBASIC9.12□□□□□ -0.95
Lmo4P61969 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm9008-201ENSMUST00000097218 2353 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
Lmo4P61969 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
Lmo4P61969 Gm13135-201ENSMUST00000117628 3121 ntBASIC9.11□□□□□ -0.95
Lmo4P61969 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Kdm2b-202ENSMUST00000046073 5180 ntAPPRIS P2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Aldoa-201ENSMUST00000032934 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Tspear-201ENSMUST00000092366 2446 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Cend1-203ENSMUST00000137488 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Ccdc78-201ENSMUST00000095500 1651 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
Lmo4P61969 Nfe2l1-210ENSMUST00000167110 3547 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
Lmo4P61969 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Lmo4P61969 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC9.11□□□□□ -0.95
Lmo4P61969 Eno3-201ENSMUST00000072841 1454 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms