Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Atp6v1a-201ENSMUST00000063661 3896 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Pdx1P52946 Trpm1-217ENSMUST00000206263 5493 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Prdm5-204ENSMUST00000172638 1714 ntTSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Flot2-202ENSMUST00000073660 2568 ntAPPRIS ALT1 TSL 5 BASIC11.18□□□□□ -0.62
Pdx1P52946 Als2-204ENSMUST00000163058 5379 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Agrn-203ENSMUST00000105575 7262 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Pars2-202ENSMUST00000106781 3046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Col6a6-202ENSMUST00000098441 8781 ntAPPRIS P2 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Dmrtc1b-203ENSMUST00000118842 1321 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Tgfbr1-201ENSMUST00000007757 5756 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pdx1P52946 Snord17-201ENSMUST00000104526 238 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Gm15528-201ENSMUST00000117821 864 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC11.17□□□□□ -0.62
Pdx1P52946 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Gm24992-201ENSMUST00000157412 130 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Ddt-201ENSMUST00000001716 649 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Mir7051-201ENSMUST00000184167 73 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Gm3551-201ENSMUST00000190750 664 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Med8-201ENSMUST00000019229 1145 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Gm37299-201ENSMUST00000193951 826 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Gm37826-201ENSMUST00000195329 322 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Gm9645-201ENSMUST00000197131 792 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Gm44980-201ENSMUST00000205826 314 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC11.17□□□□□ -0.62
Pdx1P52946 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.17□□□□□ -0.62
Pdx1P52946 Olfr1163-201ENSMUST00000099835 1043 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Pdx1P52946 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Etv1-211ENSMUST00000162563 1865 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Pdx1P52946 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.17□□□□□ -0.62
Pdx1P52946 Pofut1-201ENSMUST00000049863 5600 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Adcy8-201ENSMUST00000023007 6990 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Pdx1P52946 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.16□□□□□ -0.62
Pdx1P52946 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC11.16□□□□□ -0.62
Pdx1P52946 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Gm13135-201ENSMUST00000117628 3121 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Pmaip1-201ENSMUST00000025399 2646 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Clic4-201ENSMUST00000037099 4119 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Iqgap3-201ENSMUST00000071812 5756 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pdx1P52946 Use1-202ENSMUST00000110053 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC11.16□□□□□ -0.62
Pdx1P52946 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Gm6485-201ENSMUST00000160676 439 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Mir3547-201ENSMUST00000175461 88 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Pdx1P52946 Gm37284-201ENSMUST00000193607 539 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Gm44421-201ENSMUST00000205064 1221 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC11.16□□□□□ -0.62
Pdx1P52946 Gm45770-201ENSMUST00000212105 616 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 AC125486.1-201ENSMUST00000218701 320 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.16□□□□□ -0.62
Pdx1P52946 AC160929.1-201ENSMUST00000221247 415 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Gm18974-201ENSMUST00000221478 1031 ntBASIC11.16□□□□□ -0.62
Pdx1P52946 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Pdx1P52946 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Pdx1P52946 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms