Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Shmt1P50431 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Shmt1P50431 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.5
Shmt1P50431 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Phldb2-201ENSMUST00000036355 5483 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Sirt2-208ENSMUST00000155327 2117 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Lrrc74b-201ENSMUST00000023442 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Hist1h2bk-201ENSMUST00000110455 476 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Shmt1P50431 Serf2-202ENSMUST00000110615 876 ntTSL 2 BASIC11.95□□□□□ -0.5
Shmt1P50431 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC11.95□□□□□ -0.5
Shmt1P50431 Gm21972-201ENSMUST00000135197 776 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Shmt1P50431 Gm15744-201ENSMUST00000161734 213 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Gm19246-201ENSMUST00000173599 255 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Gm39288-201ENSMUST00000210554 446 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Gm45460-201ENSMUST00000211385 1038 ntTSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Lgi3-203ENSMUST00000226548 1001 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Nop10-201ENSMUST00000028553 1109 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Gm23680-201ENSMUST00000083162 164 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Zmiz2-205ENSMUST00000109787 4116 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.95□□□□□ -0.5
Shmt1P50431 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Paqr8-203ENSMUST00000187651 1463 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Shmt1P50431 Map4-214ENSMUST00000199498 4055 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Bora-201ENSMUST00000022656 2726 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Shmt1P50431 Enpp7-202ENSMUST00000106273 1408 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 AC153380.1-201ENSMUST00000214959 2364 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Sgca-202ENSMUST00000103162 1724 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Mybpc3-202ENSMUST00000137942 4134 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 AC158636.1-201ENSMUST00000220118 1393 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm43152-201ENSMUST00000202495 1638 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 St6galnac5-201ENSMUST00000044278 5667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Abcg2-202ENSMUST00000114294 2178 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Dab2-211ENSMUST00000161812 2710 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Ighv10-3-201ENSMUST00000103495 377 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 Ostm1-202ENSMUST00000105497 770 ntTSL 2 BASIC11.94□□□□□ -0.5
Shmt1P50431 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm8302-201ENSMUST00000119217 852 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Gm13791-201ENSMUST00000123263 608 ntTSL 3 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm25554-201ENSMUST00000158075 113 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 Mir6407-201ENSMUST00000184510 101 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Gm43552-201ENSMUST00000196121 365 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm43380-201ENSMUST00000200421 220 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.94□□□□□ -0.5
Shmt1P50431 Gm3793-201ENSMUST00000204973 672 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 CT025553.1-201ENSMUST00000226292 299 ntBASIC11.94□□□□□ -0.5
Shmt1P50431 Tff2-201ENSMUST00000024826 584 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 Zdhhc20-201ENSMUST00000089473 5186 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 4930563D23Rik-201ENSMUST00000062638 2646 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Shmt1P50431 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Fbn2-201ENSMUST00000025497 10480 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Dip2a-201ENSMUST00000036033 6322 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC11.94□□□□□ -0.5
Shmt1P50431 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Shmt1P50431 Mlc1-201ENSMUST00000042594 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms