Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 5730405O15Rik-201ENSMUST00000127521 1749 ntTSL 2 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Fen1-202ENSMUST00000116542 2100 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm10419-202ENSMUST00000196693 2530 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm45496-201ENSMUST00000209918 2917 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm25076-201ENSMUST00000104098 132 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm14942-201ENSMUST00000119642 336 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Dmrtc1a-204ENSMUST00000121197 1067 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm27003-201ENSMUST00000182590 497 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm44100-201ENSMUST00000204329 436 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 AC129219.2-201ENSMUST00000224324 701 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 AC156501.1-201ENSMUST00000228219 270 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 AC135114.1-201ENSMUST00000228682 270 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Dlec1-206ENSMUST00000140326 5815 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Grin1-208ENSMUST00000114318 3920 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Apol9a-202ENSMUST00000089452 1527 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Rpap2-202ENSMUST00000112650 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Psmc2-201ENSMUST00000030769 1785 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Ndufa11-201ENSMUST00000002452 2661 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Nudt13-203ENSMUST00000223663 1633 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Psd3-213ENSMUST00000212505 3253 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Gm37651-201ENSMUST00000194679 1494 ntBASIC10.36□□□□□ -0.75
Nkx2-2P42586 Add2-207ENSMUST00000203724 3143 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nkx2-2P42586 Prf1-201ENSMUST00000035419 1968 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Lrrc55-201ENSMUST00000099930 2217 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm9415-201ENSMUST00000200462 1321 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Epha7-204ENSMUST00000108194 2323 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Rbl2-210ENSMUST00000211136 4504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm13556-201ENSMUST00000132692 1412 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Rwdd3-205ENSMUST00000106467 1158 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Kalrn-206ENSMUST00000114954 4677 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Mir5132-201ENSMUST00000175166 71 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Csmd2os-202ENSMUST00000179945 643 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm9211-201ENSMUST00000182882 975 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 Ly6e-203ENSMUST00000185861 838 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm37458-201ENSMUST00000194055 410 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm37905-201ENSMUST00000195310 341 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm43138-201ENSMUST00000199123 708 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Fam228a-203ENSMUST00000220978 861 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 AC171241.1-201ENSMUST00000228144 1166 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm43152-201ENSMUST00000202495 1638 ntBASIC10.35□□□□□ -0.75
Nkx2-2P42586 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Serpinb9c-202ENSMUST00000110284 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Cdk13-207ENSMUST00000223490 12548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nkx2-2P42586 Ass1-201ENSMUST00000102840 1696 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Gm9035-201ENSMUST00000218318 1697 ntBASIC10.34□□□□□ -0.75
Nkx2-2P42586 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nkx2-2P42586 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 58.4 ms