Protein–RNA interactions for Protein: P41272

Cd27, CD27 antigen, mousemouse

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd27P41272 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd27P41272 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd27P41272 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC9.11□□□□□ -0.95
Cd27P41272 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.11□□□□□ -0.95
Cd27P41272 Smtn-203ENSMUST00000075118 3117 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
Cd27P41272 Gm17213-201ENSMUST00000165161 1360 ntBASIC9.11□□□□□ -0.95
Cd27P41272 Bub3-203ENSMUST00000207442 3414 ntAPPRIS ALT1 TSL 3 BASIC9.11□□□□□ -0.95
Cd27P41272 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd27P41272 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC9.11□□□□□ -0.95
Cd27P41272 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Cd27P41272 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Xpot-203ENSMUST00000218004 6005 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Mpv17l-204ENSMUST00000141971 2155 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Catsper3-201ENSMUST00000021961 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Gm37447-201ENSMUST00000195625 2928 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Etfrf1-201ENSMUST00000039729 2436 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Eef1a1-201ENSMUST00000042235 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Pif1-203ENSMUST00000134538 3395 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Tex13c1-201ENSMUST00000105113 2074 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
Cd27P41272 Igkv3-12-201ENSMUST00000103396 359 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cd27P41272 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
Cd27P41272 Snord17-201ENSMUST00000104526 238 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Gm24992-201ENSMUST00000157412 130 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Bhmt-ps1-201ENSMUST00000178743 1224 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Psmb6-201ENSMUST00000018430 798 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC9.1□□□□□ -0.95
Cd27P41272 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Gm45398-201ENSMUST00000210561 165 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Gm18165-201ENSMUST00000217426 928 ntBASIC9.1□□□□□ -0.95
Cd27P41272 AC125486.1-201ENSMUST00000218701 320 ntBASIC9.1□□□□□ -0.95
Cd27P41272 CT030637.1-201ENSMUST00000228016 669 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Arl16-201ENSMUST00000076921 911 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Gm5879-201ENSMUST00000089501 1209 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Mest-210ENSMUST00000157040 2383 ntAPPRIS ALT1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
Cd27P41272 Ormdl2-201ENSMUST00000026409 1573 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Plagl2-201ENSMUST00000056924 5485 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Ing1-206ENSMUST00000210740 1866 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 AC121870.2-201ENSMUST00000214343 1870 ntBASIC9.1□□□□□ -0.95
Cd27P41272 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Fam47e-203ENSMUST00000146417 1357 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Akr1b8-201ENSMUST00000038406 1358 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Lgals4-201ENSMUST00000066723 1384 ntAPPRIS P2 TSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 4930555B11Rik-201ENSMUST00000123210 1533 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
Cd27P41272 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC9.1□□□□□ -0.95
Cd27P41272 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC9.09□□□□□ -0.95
Cd27P41272 Lrtm2-204ENSMUST00000168793 3407 ntAPPRIS P1 TSL 5 BASIC9.09□□□□□ -0.95
Cd27P41272 Ubtf-202ENSMUST00000079589 3286 ntAPPRIS P3 TSL 5 BASIC9.09□□□□□ -0.95
Cd27P41272 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Gm45677-201ENSMUST00000209975 1341 ntBASIC9.09□□□□□ -0.95
Cd27P41272 Gm8899-201ENSMUST00000214635 1332 ntBASIC9.09□□□□□ -0.95
Cd27P41272 Rapgef6-202ENSMUST00000101206 5864 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cd27P41272 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Vgll4-201ENSMUST00000032459 2028 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Rin2-202ENSMUST00000110005 4641 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
Cd27P41272 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC9.09□□□□□ -0.95
Cd27P41272 Eif5a2-201ENSMUST00000060500 5027 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC9.09□□□□□ -0.95
Cd27P41272 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Nr2c1-202ENSMUST00000099343 2413 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Cd2bp2-202ENSMUST00000166791 3284 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC9.09□□□□□ -0.95
Cd27P41272 Gm13326-201ENSMUST00000118730 1011 ntBASIC9.09□□□□□ -0.95
Cd27P41272 Gm12129-201ENSMUST00000120104 1147 ntBASIC9.09□□□□□ -0.95
Cd27P41272 Gm13605-201ENSMUST00000124489 658 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Cd27P41272 Gm14291-201ENSMUST00000143645 804 ntTSL 2 BASIC9.09□□□□□ -0.95
Cd27P41272 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms