Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 Gm45187-201ENSMUST00000207697 2760 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Gm15513-201ENSMUST00000140646 1569 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Gpr146-203ENSMUST00000100514 4264 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Slc20a1-201ENSMUST00000028880 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Ints10-201ENSMUST00000034328 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 CT010462.1-202ENSMUST00000222225 2225 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 8430408G22Rik-201ENSMUST00000067354 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC10.95□□□□□ -0.66
TfamP40630 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC10.95□□□□□ -0.66
TfamP40630 Gm13916-201ENSMUST00000117368 628 ntBASIC10.95□□□□□ -0.66
TfamP40630 Gm12501-201ENSMUST00000119163 529 ntBASIC10.95□□□□□ -0.66
TfamP40630 1500011K16Rik-201ENSMUST00000135091 800 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
TfamP40630 Gm6108-201ENSMUST00000208365 367 ntBASIC10.95□□□□□ -0.66
TfamP40630 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC10.95□□□□□ -0.66
TfamP40630 Gm7293-201ENSMUST00000216682 1007 ntBASIC10.95□□□□□ -0.66
TfamP40630 AC102569.1-201ENSMUST00000221563 685 ntBASIC10.95□□□□□ -0.66
TfamP40630 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Gm21811-201ENSMUST00000096485 930 ntBASIC10.95□□□□□ -0.66
TfamP40630 Pou6f1-204ENSMUST00000176271 4575 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Slc29a3-201ENSMUST00000117513 5240 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Ric8a-201ENSMUST00000026558 3406 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Dhx34-201ENSMUST00000094816 4073 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Fibcd1-201ENSMUST00000028188 4751 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Kat6b-204ENSMUST00000182405 6977 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Treml4-201ENSMUST00000059873 1744 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
TfamP40630 Tmem19-201ENSMUST00000092170 3012 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Il17rd-201ENSMUST00000035336 8280 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Invs-201ENSMUST00000030029 5633 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
TfamP40630 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Tmem109-201ENSMUST00000038128 2188 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Sparcl1-201ENSMUST00000031249 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 4933413J09Rik-202ENSMUST00000059648 3387 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Arhgef9-201ENSMUST00000113873 2117 ntTSL 5 BASIC10.94□□□□□ -0.66
TfamP40630 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Chek1-202ENSMUST00000172702 3797 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Asns-202ENSMUST00000115542 2016 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TfamP40630 Igtp-201ENSMUST00000035266 2022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 AC125374.1-201ENSMUST00000213573 1400 ntBASIC10.94□□□□□ -0.66
TfamP40630 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 AC109214.1-201ENSMUST00000219520 1372 ntBASIC10.94□□□□□ -0.66
TfamP40630 Hhip-201ENSMUST00000079038 9074 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Klhl18-205ENSMUST00000198400 4638 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Slc2a10-201ENSMUST00000029196 3544 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Anxa9-202ENSMUST00000107183 1872 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 CT025681.1-201ENSMUST00000225453 1855 ntBASIC10.94□□□□□ -0.66
TfamP40630 Carns1-201ENSMUST00000167055 3968 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
TfamP40630 Mthfr-201ENSMUST00000069604 6072 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Mllt3-201ENSMUST00000078090 6069 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Iqce-201ENSMUST00000041783 6037 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Chil1-207ENSMUST00000153856 1839 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Gm12579-201ENSMUST00000118040 783 ntBASIC10.94□□□□□ -0.66
TfamP40630 Gm13461-201ENSMUST00000120980 662 ntBASIC10.94□□□□□ -0.66
TfamP40630 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Gm23085-201ENSMUST00000157849 293 ntBASIC10.94□□□□□ -0.66
TfamP40630 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC10.94□□□□□ -0.66
TfamP40630 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Gm45186-201ENSMUST00000206874 478 ntBASIC10.94□□□□□ -0.66
TfamP40630 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Gm6722-201ENSMUST00000221586 390 ntBASIC10.94□□□□□ -0.66
TfamP40630 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Neil1-201ENSMUST00000034842 1170 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Olfr450-201ENSMUST00000067503 933 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
TfamP40630 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
TfamP40630 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Ntrk2-207ENSMUST00000225488 4706 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
TfamP40630 Megf11-202ENSMUST00000093829 3652 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Stkld1-201ENSMUST00000055406 2169 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Rbfox2-203ENSMUST00000166610 6573 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Hsd3b4-201ENSMUST00000179429 1575 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TfamP40630 Gm10681-203ENSMUST00000186215 1575 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
TfamP40630 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Gm36957-201ENSMUST00000192982 2824 ntBASIC10.94□□□□□ -0.66
TfamP40630 Faim2-201ENSMUST00000023750 4520 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Gm43522-201ENSMUST00000196697 1922 ntBASIC10.94□□□□□ -0.66
TfamP40630 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
TfamP40630 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms