Protein–RNA interactions for Protein: P40338

Vhl, von Hippel-Lindau disease tumor suppressor, mousemouse

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VhlP40338 Gm11413-201ENSMUST00000155822 1461 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Pnpla6-201ENSMUST00000004681 4438 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Gpr18-201ENSMUST00000055475 1498 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Nfe2l1-212ENSMUST00000169828 3530 ntTSL 2 BASIC9.29□□□□□ -0.92
VhlP40338 Kdm4a-204ENSMUST00000106406 4663 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Gm45828-201ENSMUST00000206938 1836 ntBASIC9.29□□□□□ -0.92
VhlP40338 Ankrd11-202ENSMUST00000098334 8455 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Kdelr1-205ENSMUST00000211716 1350 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Krba1-201ENSMUST00000031815 3685 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Col24a1-201ENSMUST00000029848 7143 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Myo18a-224ENSMUST00000172303 6339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Zfp629-203ENSMUST00000122066 5850 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Rplp2-202ENSMUST00000106003 449 ntAPPRIS P1 TSL 2 BASIC9.29□□□□□ -0.92
VhlP40338 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Gm14726-201ENSMUST00000120623 896 ntBASIC9.29□□□□□ -0.92
VhlP40338 Gm7150-201ENSMUST00000122032 981 ntBASIC9.29□□□□□ -0.92
VhlP40338 Gm11587-201ENSMUST00000128274 1120 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Gm22846-201ENSMUST00000157706 270 ntBASIC9.29□□□□□ -0.92
VhlP40338 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC9.29□□□□□ -0.92
VhlP40338 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC9.29□□□□□ -0.92
VhlP40338 Rpl41-203ENSMUST00000176683 437 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
VhlP40338 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC9.29□□□□□ -0.92
VhlP40338 2610016A17Rik-202ENSMUST00000186768 689 ntBASIC9.29□□□□□ -0.92
VhlP40338 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC9.29□□□□□ -0.92
VhlP40338 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC9.29□□□□□ -0.92
VhlP40338 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC9.29□□□□□ -0.92
VhlP40338 AC132384.14-201ENSMUST00000219346 1147 ntBASIC9.29□□□□□ -0.92
VhlP40338 1500015O10Rik-201ENSMUST00000027217 902 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Dusp22-202ENSMUST00000095914 3015 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Madd-202ENSMUST00000066473 5974 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Gm16169-202ENSMUST00000162432 2128 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Slc1a2-201ENSMUST00000005220 2127 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Chdh-202ENSMUST00000118917 3406 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Nrg1-212ENSMUST00000208598 1778 ntTSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Ano10-203ENSMUST00000214409 2384 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Man2b2-201ENSMUST00000031002 3330 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC9.29□□□□□ -0.92
VhlP40338 Asb1-201ENSMUST00000027538 5826 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
VhlP40338 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
VhlP40338 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Gm44826-201ENSMUST00000207648 2332 ntBASIC9.28□□□□□ -0.92
VhlP40338 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Tfam-201ENSMUST00000092430 4167 ntAPPRIS P2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
VhlP40338 Mroh8-202ENSMUST00000143663 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Ogfod1-202ENSMUST00000093301 5141 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Prkd2-202ENSMUST00000168093 3251 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Ppp1r17-201ENSMUST00000052827 1757 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Arsg-202ENSMUST00000106696 1508 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Rad1-202ENSMUST00000100775 4085 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Timm10b-204ENSMUST00000106784 494 ntTSL 3 BASIC9.28□□□□□ -0.92
VhlP40338 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC9.28□□□□□ -0.92
VhlP40338 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC9.28□□□□□ -0.92
VhlP40338 Gm15207-201ENSMUST00000119259 442 ntBASIC9.28□□□□□ -0.92
VhlP40338 Gm12744-201ENSMUST00000146976 519 ntTSL 3 BASIC9.28□□□□□ -0.92
VhlP40338 Gm15722-201ENSMUST00000159271 661 ntTSL 3 BASIC9.28□□□□□ -0.92
VhlP40338 U2af1l4-218ENSMUST00000166960 747 ntTSL 3 BASIC9.28□□□□□ -0.92
VhlP40338 Ank3-234ENSMUST00000182993 1233 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Gm8885-201ENSMUST00000189382 598 ntBASIC9.28□□□□□ -0.92
VhlP40338 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Gm43184-201ENSMUST00000197247 542 ntBASIC9.28□□□□□ -0.92
VhlP40338 Gm43179-201ENSMUST00000198797 275 ntBASIC9.28□□□□□ -0.92
VhlP40338 Gm42867-201ENSMUST00000202995 469 ntBASIC9.28□□□□□ -0.92
VhlP40338 Gm3961-201ENSMUST00000204425 994 ntBASIC9.28□□□□□ -0.92
VhlP40338 Aprt-ps-201ENSMUST00000212311 505 ntBASIC9.28□□□□□ -0.92
VhlP40338 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC9.28□□□□□ -0.92
VhlP40338 AC122891.1-201ENSMUST00000218671 268 ntBASIC9.28□□□□□ -0.92
VhlP40338 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 AC161537.1-201ENSMUST00000226199 1015 ntBASIC9.28□□□□□ -0.92
VhlP40338 Isoc2b-201ENSMUST00000064547 1080 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Gm4978-201ENSMUST00000071565 801 ntBASIC9.28□□□□□ -0.92
VhlP40338 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Dlgap1-214ENSMUST00000155016 4712 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Slc9a3-204ENSMUST00000225423 2589 ntAPPRIS ALT2 BASIC9.28□□□□□ -0.92
VhlP40338 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.28□□□□□ -0.92
VhlP40338 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
VhlP40338 Dgkb-205ENSMUST00000221176 1439 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms