Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Setbp1-201ENSMUST00000025430 9953 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Smarcc2-201ENSMUST00000026433 4533 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm21817-201ENSMUST00000178584 2583 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 AC122367.1-201ENSMUST00000221978 1709 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Sez6l-206ENSMUST00000212758 2664 ntTSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Zfp652-201ENSMUST00000091565 2663 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Dcun1d2-206ENSMUST00000203604 2112 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Tcf4-203ENSMUST00000114977 3070 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Pdp1-202ENSMUST00000095144 2506 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Dhtkd1-201ENSMUST00000026924 3852 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm5846-201ENSMUST00000193146 1414 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Ttpal-207ENSMUST00000171696 4522 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm8876-201ENSMUST00000120768 1122 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
Nedd8P29595 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Gm42627-201ENSMUST00000197347 224 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm44872-201ENSMUST00000207864 420 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Gm44710-201ENSMUST00000208885 471 ntTSL 2 BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm45668-201ENSMUST00000211271 493 ntBASIC10.36□□□□□ -0.75
Nedd8P29595 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 4930578I06Rik-201ENSMUST00000022532 1033 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Polb-201ENSMUST00000033938 1201 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC10.36□□□□□ -0.75
Nedd8P29595 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Sh3bgrl-201ENSMUST00000033598 2882 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Exoc7-203ENSMUST00000106413 3298 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Zfp512-201ENSMUST00000076264 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Hipk2-204ENSMUST00000160360 3907 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Ncf2-201ENSMUST00000027754 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Bicd1-203ENSMUST00000111513 4049 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Epb41-202ENSMUST00000054917 4948 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Pax6-204ENSMUST00000111083 2370 ntAPPRIS ALT1 TSL 5 BASIC10.36□□□□□ -0.75
Nedd8P29595 Vamp5-203ENSMUST00000206154 2619 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Nedd8P29595 Gm26690-201ENSMUST00000181457 1997 ntTSL 5 BASIC10.35□□□□□ -0.75
Nedd8P29595 Atp1a3-202ENSMUST00000102858 3895 ntTSL 2 BASIC10.35□□□□□ -0.75
Nedd8P29595 Pip5k1a-201ENSMUST00000005768 3480 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nedd8P29595 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Zmynd8-221ENSMUST00000177633 5093 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Ern2-201ENSMUST00000033153 2914 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Lin54-209ENSMUST00000152387 2760 ntTSL 5 BASIC10.35□□□□□ -0.75
Nedd8P29595 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Gm43143-201ENSMUST00000196083 2023 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC10.35□□□□□ -0.75
Nedd8P29595 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Gm24644-201ENSMUST00000157114 139 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 Gm8652-201ENSMUST00000181363 964 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC10.35□□□□□ -0.75
Nedd8P29595 Gm34767-201ENSMUST00000191813 1062 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC10.35□□□□□ -0.75
Nedd8P29595 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC10.35□□□□□ -0.75
Nedd8P29595 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Inpp5b-201ENSMUST00000094782 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Tomm20-201ENSMUST00000179857 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Bmpr2-201ENSMUST00000087435 12899 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Amph-201ENSMUST00000003345 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Phc1-204ENSMUST00000159252 3744 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
Nedd8P29595 Apol9a-201ENSMUST00000081776 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Hrct1-201ENSMUST00000095109 1452 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Nedd8P29595 Elf5-206ENSMUST00000164172 2532 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Gm7357-201ENSMUST00000195361 2991 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 Zfp873-203ENSMUST00000209622 2284 ntTSL 2 BASIC10.35□□□□□ -0.75
Nedd8P29595 AC108416.1-201ENSMUST00000228755 1558 ntBASIC10.35□□□□□ -0.75
Nedd8P29595 Bicral-201ENSMUST00000040624 6579 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Nedd8P29595 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Osr2-204ENSMUST00000228152 1324 ntAPPRIS P1 BASIC10.34□□□□□ -0.75
Nedd8P29595 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 Gm43807-201ENSMUST00000200678 1781 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 Axin2-202ENSMUST00000106711 2551 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 AI854703-202ENSMUST00000154570 3806 ntAPPRIS P1 TSL 2 BASIC10.34□□□□□ -0.75
Nedd8P29595 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Gm43482-201ENSMUST00000202797 1861 ntBASIC10.34□□□□□ -0.75
Nedd8P29595 A930007I19Rik-201ENSMUST00000180737 2319 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Rufy2-202ENSMUST00000119567 4130 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 8030423F21Rik-201ENSMUST00000064097 2851 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Thbs3-202ENSMUST00000119084 2993 ntAPPRIS ALT2 TSL 5 BASIC10.34□□□□□ -0.75
Nedd8P29595 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Nedd8P29595 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms