Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Zfp426-202ENSMUST00000115562 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NclP09405 Tshz3-201ENSMUST00000021641 5098 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC16.81■□□□□ 0.28
NclP09405 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC16.81■□□□□ 0.28
NclP09405 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Gm37542-201ENSMUST00000192563 2832 ntBASIC16.81■□□□□ 0.28
NclP09405 Apon-201ENSMUST00000060782 1397 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NclP09405 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC16.81■□□□□ 0.28
NclP09405 Harbi1-202ENSMUST00000111322 1316 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Gm15197-201ENSMUST00000120526 478 ntBASIC16.81■□□□□ 0.28
NclP09405 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC16.81■□□□□ 0.28
NclP09405 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC16.81■□□□□ 0.28
NclP09405 AC158605.1-201ENSMUST00000156803 764 ntTSL 3 BASIC16.81■□□□□ 0.28
NclP09405 Gm21844-201ENSMUST00000178699 663 ntTSL 3 BASIC16.81■□□□□ 0.28
NclP09405 Gm5294-201ENSMUST00000179205 651 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NclP09405 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
NclP09405 Gm37638-201ENSMUST00000194337 1123 ntBASIC16.81■□□□□ 0.28
NclP09405 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NclP09405 Gm5599-201ENSMUST00000209602 788 ntBASIC16.81■□□□□ 0.28
NclP09405 CT030653.1-201ENSMUST00000224382 1279 ntBASIC16.81■□□□□ 0.28
NclP09405 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NclP09405 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Gm10334-201ENSMUST00000095999 876 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Cyp4b1-201ENSMUST00000102707 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
NclP09405 Slc37a1-202ENSMUST00000171233 2929 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NclP09405 Npbwr1-201ENSMUST00000044180 3692 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
NclP09405 Zmynd8-220ENSMUST00000170272 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Tfrc-201ENSMUST00000023486 4890 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NclP09405 Rbm10-205ENSMUST00000115375 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Ndufaf1-203ENSMUST00000110802 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Gtf2h5-202ENSMUST00000100955 879 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NclP09405 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NclP09405 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC16.8■□□□□ 0.28
NclP09405 Gm9508-201ENSMUST00000220084 693 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NclP09405 Krtap4-13-201ENSMUST00000050106 815 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NclP09405 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC16.8■□□□□ 0.28
NclP09405 Gm16380-201ENSMUST00000077997 478 ntBASIC16.8■□□□□ 0.28
NclP09405 Naa10-202ENSMUST00000096316 892 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NclP09405 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Zscan29-201ENSMUST00000079024 2465 ntTSL 5 BASIC16.8■□□□□ 0.28
NclP09405 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Gnas-209ENSMUST00000109088 3519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Gnas-201ENSMUST00000080493 3519 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Lrmp-201ENSMUST00000032396 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC16.8■□□□□ 0.28
NclP09405 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NclP09405 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
NclP09405 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC16.8■□□□□ 0.28
NclP09405 Zcwpw2-202ENSMUST00000187329 1469 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NclP09405 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NclP09405 Uspl1-201ENSMUST00000050472 3757 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Rspo2-201ENSMUST00000063492 3338 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Gm43334-201ENSMUST00000197740 1318 ntBASIC16.79■□□□□ 0.28
NclP09405 Tle6-210ENSMUST00000142948 1961 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Gm15617-201ENSMUST00000118973 771 ntBASIC16.79■□□□□ 0.28
NclP09405 Gm9673-201ENSMUST00000119287 781 ntBASIC16.79■□□□□ 0.28
NclP09405 Gm12791-201ENSMUST00000120788 655 ntBASIC16.79■□□□□ 0.28
NclP09405 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Gm10631-201ENSMUST00000153288 494 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Bloc1s1-205ENSMUST00000153731 613 ntTSL 5 BASIC16.79■□□□□ 0.28
NclP09405 Gm12406-201ENSMUST00000155382 697 ntTSL 3 BASIC16.79■□□□□ 0.28
NclP09405 Gm23218-201ENSMUST00000158124 276 ntBASIC16.79■□□□□ 0.28
NclP09405 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Dydc1-203ENSMUST00000189865 995 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 D5Ertd615e-203ENSMUST00000198493 1032 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Gm43002-201ENSMUST00000200310 155 ntBASIC16.79■□□□□ 0.28
NclP09405 Bcl2l12-205ENSMUST00000207755 605 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
NclP09405 Gm2594-201ENSMUST00000214774 742 ntBASIC16.79■□□□□ 0.28
NclP09405 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC16.79■□□□□ 0.28
NclP09405 Gm18514-201ENSMUST00000218980 436 ntBASIC16.79■□□□□ 0.28
NclP09405 Hsd17b3-201ENSMUST00000039832 1131 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NclP09405 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
NclP09405 n-R5s185-201ENSMUST00000083953 119 ntBASIC16.79■□□□□ 0.28
NclP09405 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC16.79■□□□□ 0.28
NclP09405 Smtn-204ENSMUST00000110011 3020 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
NclP09405 Dcaf8-201ENSMUST00000074144 4656 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NclP09405 Vdr-201ENSMUST00000023119 4370 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 93.8 ms