Protein–RNA interactions for Protein: P05622

Pdgfrb, Platelet-derived growth factor receptor beta, mousemouse

Predictions only

Length 1,098 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfrbP05622 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
PdgfrbP05622 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Snap23-201ENSMUST00000028743 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm15329-201ENSMUST00000121408 155 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 4930471C06Rik-202ENSMUST00000143070 579 ntTSL 3 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm14198-201ENSMUST00000153208 948 ntTSL 2 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm21976-204ENSMUST00000186911 528 ntTSL 5 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm44506-201ENSMUST00000206278 965 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm17825-201ENSMUST00000206836 794 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm8342-201ENSMUST00000209839 757 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm7207-201ENSMUST00000211575 1067 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Spcs1-203ENSMUST00000226374 592 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 AC131330.1-201ENSMUST00000227814 1015 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 1700001J03Rik-201ENSMUST00000073721 787 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm6560-201ENSMUST00000198588 1591 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Btrc-209ENSMUST00000224478 2194 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Bbip1-201ENSMUST00000135402 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm44663-201ENSMUST00000206898 3150 ntBASIC11.52□□□□□ -0.57
PdgfrbP05622 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm16168-201ENSMUST00000161091 1359 ntTSL 3 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC11.52□□□□□ -0.57
PdgfrbP05622 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Fam53c-201ENSMUST00000049281 4475 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Fut2-201ENSMUST00000069800 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Slc14a2-202ENSMUST00000163367 1428 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
PdgfrbP05622 Vps54-201ENSMUST00000006221 4323 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PdgfrbP05622 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
PdgfrbP05622 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 AC167565.1-201ENSMUST00000226980 1833 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Mroh1-201ENSMUST00000092595 5111 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm22711-201ENSMUST00000116890 133 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm14659-201ENSMUST00000117667 843 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm13045-201ENSMUST00000119019 712 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm15549-201ENSMUST00000121595 622 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC11.51□□□□□ -0.57
PdgfrbP05622 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Mir7070-201ENSMUST00000183657 86 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Gm8574-201ENSMUST00000203207 924 ntBASIC11.51□□□□□ -0.57
PdgfrbP05622 1700003I16Rik-201ENSMUST00000205198 1058 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC11.51□□□□□ -0.57
PdgfrbP05622 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PdgfrbP05622 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
PdgfrbP05622 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 Ophn1-201ENSMUST00000033560 7170 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
PdgfrbP05622 St6galnac6-201ENSMUST00000072111 2277 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
PdgfrbP05622 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Fam84a-201ENSMUST00000020926 4164 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Lepr-203ENSMUST00000106921 5542 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Elavl2-207ENSMUST00000107118 3797 ntTSL 5 BASIC11.5□□□□□ -0.57
PdgfrbP05622 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 R3hdm2-210ENSMUST00000164831 2937 ntTSL 5 BASIC11.5□□□□□ -0.57
PdgfrbP05622 Nuak2-201ENSMUST00000072177 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Eef2k-203ENSMUST00000106488 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC11.5□□□□□ -0.57
PdgfrbP05622 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Btg2-201ENSMUST00000020692 2743 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Zfp68-201ENSMUST00000063262 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
PdgfrbP05622 Tatdn3-203ENSMUST00000110891 1214 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Tatdn3-204ENSMUST00000110893 1242 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC11.5□□□□□ -0.57
PdgfrbP05622 B9d1os-201ENSMUST00000137010 674 ntBASIC11.5□□□□□ -0.57
PdgfrbP05622 Gm10051-201ENSMUST00000145209 414 ntBASIC11.5□□□□□ -0.57
PdgfrbP05622 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC11.5□□□□□ -0.57
PdgfrbP05622 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
PdgfrbP05622 Gm8988-201ENSMUST00000155015 1240 ntBASIC11.5□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 162.5 ms