Protein–RNA interactions for Protein: J3QNE4

Ccdc180, Coiled-coil domain-containing 180, mousemouse

Predictions only

Length 1,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc180J3QNE4 Utp23-203ENSMUST00000137116 2921 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Os9-202ENSMUST00000164259 2627 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm5766-201ENSMUST00000160520 1977 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm42432-201ENSMUST00000197902 1617 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm23255-201ENSMUST00000102244 110 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Gm8643-201ENSMUST00000195228 625 ntBASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Nps-202ENSMUST00000210697 1082 ntTSL 5 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Fanca-202ENSMUST00000118395 3274 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Lrp1-203ENSMUST00000121829 2887 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Ccdc180J3QNE4 Stxbp5l-204ENSMUST00000114781 3544 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 CT025678.1-201ENSMUST00000214795 2972 ntBASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Cxcl11-201ENSMUST00000077820 1581 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Supt3-201ENSMUST00000050630 1508 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Pex3-207ENSMUST00000170376 1381 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Gm23595-201ENSMUST00000104306 130 ntBASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Mir1249-201ENSMUST00000116791 98 ntBASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Gm8152-201ENSMUST00000120842 637 ntBASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Cd79b-202ENSMUST00000167143 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Gm20443-201ENSMUST00000173840 735 ntTSL 3 BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 CT010505.2-201ENSMUST00000227918 998 ntBASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Moxd2-201ENSMUST00000031937 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Slc38a3-201ENSMUST00000010208 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Ebf2-202ENSMUST00000176029 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Ccdc180J3QNE4 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm8873-201ENSMUST00000217847 1439 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Rxfp3-201ENSMUST00000058007 4275 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Cd19-204ENSMUST00000206325 2452 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Wars-204ENSMUST00000161154 1824 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Clu-201ENSMUST00000022616 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm24933-201ENSMUST00000103762 110 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm23252-201ENSMUST00000103776 110 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Srp14-202ENSMUST00000110862 587 ntTSL 2 BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Olfr29-ps1-201ENSMUST00000117959 963 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm16209-201ENSMUST00000118457 627 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm10171-201ENSMUST00000126220 628 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm26443-201ENSMUST00000179610 110 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Mir8091-201ENSMUST00000183602 139 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm17796-201ENSMUST00000189015 1213 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Saa-ps-201ENSMUST00000211148 320 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 AC154806.7-201ENSMUST00000227998 202 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm10233-201ENSMUST00000089275 628 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 AC153524.2-202ENSMUST00000220401 1794 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Tor3a-201ENSMUST00000079625 3285 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Cog4-201ENSMUST00000034203 2737 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Cyp2d41-ps-201ENSMUST00000180453 1503 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Ecd-201ENSMUST00000022344 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Gm19027-201ENSMUST00000187291 1355 ntBASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC20.36■□□□□ 0.85
Ccdc180J3QNE4 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Gm24294-201ENSMUST00000158295 277 ntBASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Milr1-206ENSMUST00000182896 918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Milr1-207ENSMUST00000182908 811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Mkrn1-ps1-201ENSMUST00000122035 1390 ntBASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Gm38344-201ENSMUST00000195306 1353 ntBASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Gm24346-201ENSMUST00000158712 194 ntBASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Marc1-203ENSMUST00000189492 1239 ntTSL 5 BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Gm42511-201ENSMUST00000196160 234 ntBASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Ghrl-203ENSMUST00000203588 237 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Psca-201ENSMUST00000023265 860 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Tollip-201ENSMUST00000001950 3788 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Hoxc5-201ENSMUST00000001709 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Ccdc180J3QNE4 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Med12l-203ENSMUST00000040846 3747 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 AC126257.2-201ENSMUST00000215507 2300 ntBASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Msl1-202ENSMUST00000037930 1303 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Ccdc180J3QNE4 Ikzf2-202ENSMUST00000187184 2013 ntTSL 5 BASIC20.34■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms