Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Psmd10-201ENSMUST00000033805 1430 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Bcl2l15-202ENSMUST00000106822 1902 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm10728-201ENSMUST00000194292 1829 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 Tbc1d1-204ENSMUST00000121370 5419 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Dram1-201ENSMUST00000020249 2807 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Zdhhc21-202ENSMUST00000107239 1148 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm14071-201ENSMUST00000117817 509 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm12663-201ENSMUST00000118481 958 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm11354-201ENSMUST00000121974 422 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 0610043K17Rik-201ENSMUST00000123107 614 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm16167-201ENSMUST00000160428 1065 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm5795-202ENSMUST00000166275 612 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm8279-203ENSMUST00000170040 612 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm10413-202ENSMUST00000177913 612 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm3424-202ENSMUST00000178418 618 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm3187-201ENSMUST00000178429 618 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm10338-202ENSMUST00000178623 612 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm8246-201ENSMUST00000179411 618 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm3012-202ENSMUST00000179486 612 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Vmn1r205-201ENSMUST00000185475 951 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm28345-201ENSMUST00000188769 1139 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm28970-201ENSMUST00000191098 1139 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm43177-201ENSMUST00000197032 1107 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm4870-201ENSMUST00000198525 1251 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 Gm42710-201ENSMUST00000200608 985 ntBASIC10.94□□□□□ -0.66
SrfQ9JM73 Pet100-203ENSMUST00000207389 363 ntTSL 2 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Stfa2-201ENSMUST00000023619 423 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gsto1-201ENSMUST00000026050 1182 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Scube2-201ENSMUST00000007423 3571 ntTSL 2 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Kcne2-202ENSMUST00000113971 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Ccndbp1-202ENSMUST00000099488 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
SrfQ9JM73 Dpysl5-201ENSMUST00000088081 5022 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Tmem237-205ENSMUST00000186794 1533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
SrfQ9JM73 Poc1a-201ENSMUST00000072206 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Prdm9-205ENSMUST00000147532 1447 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SrfQ9JM73 AC138329.2-201ENSMUST00000225579 1842 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Foxk1-201ENSMUST00000072837 7439 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SrfQ9JM73 AC116503.1-201ENSMUST00000215445 2192 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Sstr2-203ENSMUST00000146390 2143 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm9575-201ENSMUST00000122140 1339 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm5053-201ENSMUST00000208361 1678 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Clrn1-203ENSMUST00000072551 1662 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 5033428I22Rik-201ENSMUST00000181638 2040 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Casp8ap2-202ENSMUST00000108178 1189 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Prl8a8-202ENSMUST00000110350 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Cat-202ENSMUST00000111168 779 ntTSL 3 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Clps-202ENSMUST00000114785 369 ntTSL 2 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Rbfox1-202ENSMUST00000115841 1191 ntTSL 5 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm11996-201ENSMUST00000117538 915 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm8111-201ENSMUST00000117659 987 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm15374-201ENSMUST00000119313 844 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm12712-201ENSMUST00000120676 801 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm12670-201ENSMUST00000123606 576 ntTSL 2 BASIC10.93□□□□□ -0.66
SrfQ9JM73 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm15809-201ENSMUST00000159361 661 ntTSL 5 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm7719-201ENSMUST00000182374 975 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Tmem242-202ENSMUST00000185896 780 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm28926-201ENSMUST00000191063 680 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
SrfQ9JM73 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 Olfr27-201ENSMUST00000214052 1076 ntAPPRIS P1 TSL 3 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm34973-201ENSMUST00000217087 572 ntTSL 3 BASIC10.93□□□□□ -0.66
SrfQ9JM73 AI463170-202ENSMUST00000218453 558 ntTSL 2 BASIC10.93□□□□□ -0.66
SrfQ9JM73 Gm8255-201ENSMUST00000218693 305 ntBASIC10.93□□□□□ -0.66
SrfQ9JM73 4921508M14Rik-201ENSMUST00000061679 1099 ntBASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms