Protein–RNA interactions for Protein: Q9ERD7

Tubb3, Tubulin beta-3 chain, mousemouse

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubb3Q9ERD7 AC122408.1-201ENSMUST00000218949 218 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Atp6v1g1-201ENSMUST00000035301 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Gm7551-201ENSMUST00000089593 1074 ntBASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Sema4a-201ENSMUST00000029700 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 4930563E18Rik-201ENSMUST00000180948 1553 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Sertad2-201ENSMUST00000093292 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Mum1l1-204ENSMUST00000113045 4523 ntAPPRIS P1 TSL 3 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Vps18-201ENSMUST00000037280 4054 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Nme1-203ENSMUST00000135884 3181 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Suclg2-201ENSMUST00000079847 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Derl2-206ENSMUST00000143850 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Tubb3Q9ERD7 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Fam149a-201ENSMUST00000093526 5469 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 0610038B21Rik-201ENSMUST00000181420 1687 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Zfp384-204ENSMUST00000088308 2875 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Dip2c-201ENSMUST00000166299 4822 ntTSL 5 BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Tubb3Q9ERD7 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 B230312C02Rik-201ENSMUST00000145549 1703 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 AC124433.1-202ENSMUST00000224762 1535 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm13263-201ENSMUST00000121271 838 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Cldn16-202ENSMUST00000161053 1173 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm8815-201ENSMUST00000173809 620 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm37835-201ENSMUST00000193305 361 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm44126-201ENSMUST00000204831 514 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm43916-201ENSMUST00000205062 967 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 AC154849.4-201ENSMUST00000224868 365 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Ngdn-201ENSMUST00000022815 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm9785-201ENSMUST00000062642 1006 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm5537-201ENSMUST00000091117 1252 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Pla2g4c-201ENSMUST00000043612 3382 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Gm14150-201ENSMUST00000122404 1354 ntBASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Tubb3Q9ERD7 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Dyrk4-202ENSMUST00000078521 2252 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Axin2-201ENSMUST00000052915 4260 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Nfx1-203ENSMUST00000098143 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm18798-201ENSMUST00000187264 1700 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Uba1y-ps1-201ENSMUST00000188314 1708 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Mfrp-201ENSMUST00000034654 4316 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 AC131586.1-201ENSMUST00000228844 2964 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Tmem231-201ENSMUST00000034429 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Tspyl4-201ENSMUST00000047935 3879 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Grik3-201ENSMUST00000030676 8973 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Abi1-204ENSMUST00000114544 2790 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Chmp1b-202ENSMUST00000210564 2490 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Btbd9-202ENSMUST00000168787 6857 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Hnrnpc-210ENSMUST00000228232 2535 ntAPPRIS P5 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm15207-201ENSMUST00000119259 442 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Dnmt3l-203ENSMUST00000131825 1113 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Dnmt3l-206ENSMUST00000139539 1279 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Gm19705-203ENSMUST00000181491 678 ntTSL 5 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Mir6546-201ENSMUST00000184460 62 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 1700016D08Rik-202ENSMUST00000195807 368 ntBASIC11.26□□□□□ -0.61
Tubb3Q9ERD7 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 103 ms