Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm44867-201ENSMUST00000205675 530 ntTSL 3 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Ssr4-201ENSMUST00000002090 765 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Emp3-201ENSMUST00000038876 736 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Mrps34-201ENSMUST00000043907 918 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Try10-201ENSMUST00000072103 860 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Phf21a-202ENSMUST00000068702 6023 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Efcab14-203ENSMUST00000106524 1544 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm26615-201ENSMUST00000181522 3201 ntTSL 2 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Sdk1-201ENSMUST00000074546 7063 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Psd4-201ENSMUST00000056641 4748 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Coch-201ENSMUST00000085412 2456 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 E130018N17Rik-201ENSMUST00000129713 1309 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm45677-201ENSMUST00000209975 1341 ntBASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Hdac7-201ENSMUST00000079838 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Gm13990-201ENSMUST00000151391 2701 ntTSL 5 BASIC10.57□□□□□ -0.72
Cdc40Q9DC48 Rnf44-217ENSMUST00000150806 3772 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Tmprss4-201ENSMUST00000034599 2284 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Dpep2-206ENSMUST00000227363 1844 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 4930520O04Rik-202ENSMUST00000131898 2660 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Gm22920-201ENSMUST00000102175 109 ntBASIC10.56□□□□□ -0.72
Cdc40Q9DC48 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Gm11949-201ENSMUST00000117640 372 ntBASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Gm15352-201ENSMUST00000118696 270 ntBASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Slpi-202ENSMUST00000165980 488 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Olfr431-ps1-201ENSMUST00000192435 544 ntBASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Lect2-202ENSMUST00000225183 823 ntBASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Lect2-201ENSMUST00000062806 837 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Erich3-203ENSMUST00000189969 3460 ntBASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Nek5-202ENSMUST00000209656 2253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Zfp108-202ENSMUST00000205982 2577 ntAPPRIS P2 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Lck-208ENSMUST00000167288 2074 ntTSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 5930430L01Rik-201ENSMUST00000145042 3994 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Mospd2-203ENSMUST00000112248 2487 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Awat2-202ENSMUST00000147103 1984 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC10.56□□□□□ -0.72
Cdc40Q9DC48 Mark3-208ENSMUST00000221753 2394 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Tapbpl-201ENSMUST00000043422 2352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Abi1-209ENSMUST00000140164 3403 ntAPPRIS ALT1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Jpt2-201ENSMUST00000024981 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Gm19792-201ENSMUST00000222522 2021 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Pdik1l-203ENSMUST00000105877 4674 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Rsl1-201ENSMUST00000021997 2591 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Ptpro-201ENSMUST00000077115 5049 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Gm14193-201ENSMUST00000105067 153 ntBASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Gm11783-201ENSMUST00000119549 885 ntBASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Aamdc-203ENSMUST00000124552 618 ntTSL 3 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Gm23045-201ENSMUST00000175041 96 ntBASIC10.55□□□□□ -0.72
Cdc40Q9DC48 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Gm5852-201ENSMUST00000194119 1021 ntBASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Hist1h1b-201ENSMUST00000080511 743 ntAPPRIS P1 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Mirlet7i-201ENSMUST00000083472 85 ntBASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Sipa1l3-215ENSMUST00000183096 7713 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Sipa1l3-201ENSMUST00000085809 7713 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Synpo2l-202ENSMUST00000117386 3979 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
Cdc40Q9DC48 Slc2a4-201ENSMUST00000018710 2524 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms