Protein–RNA interactions for Protein: Q9D8P7

Gtf3c6, General transcription factor 3C polypeptide 6, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c6Q9D8P7 Gm12501-201ENSMUST00000119163 529 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gm15968-201ENSMUST00000119342 1168 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gm20495-201ENSMUST00000173902 235 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gm44008-201ENSMUST00000204345 412 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gm39460-201ENSMUST00000215728 1266 ntTSL 5 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Srek1-201ENSMUST00000074616 3934 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Tmem30c-203ENSMUST00000120112 3478 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Krtap10-10-201ENSMUST00000218843 1306 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gpc5-203ENSMUST00000176912 2837 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Slc25a42-202ENSMUST00000110127 3196 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gucy1a3-204ENSMUST00000193924 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Gm37962-201ENSMUST00000195535 2034 ntBASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Gtf3c6Q9D8P7 Stau2-206ENSMUST00000128957 3907 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm38215-201ENSMUST00000192321 2233 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Galntl6-202ENSMUST00000098757 2210 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm6560-201ENSMUST00000198588 1591 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 B230317F23Rik-201ENSMUST00000052189 2472 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Prkar1a-201ENSMUST00000049527 3359 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Nit1-201ENSMUST00000111289 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 AC159308.2-201ENSMUST00000213592 2325 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Abcb8-203ENSMUST00000115077 3074 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 A630009H07Rik-201ENSMUST00000208485 2159 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Fgd5-202ENSMUST00000113466 5621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm11290-201ENSMUST00000124833 396 ntTSL 3 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm8459-201ENSMUST00000162504 760 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm2260-201ENSMUST00000184965 657 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm5149-202ENSMUST00000199980 1250 ntTSL 2 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Cmtm2b-201ENSMUST00000041973 880 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Mir219a-1-201ENSMUST00000083621 110 ntBASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gm12166-201ENSMUST00000093169 958 ntAPPRIS P1 BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Rmdn2-201ENSMUST00000040368 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Adar-204ENSMUST00000118341 2399 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Tmco4-201ENSMUST00000043042 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Mier3-201ENSMUST00000047412 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Nnt-201ENSMUST00000069902 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Ap1m2-202ENSMUST00000115433 2586 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Hepacam-201ENSMUST00000051839 3347 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Scpep1-201ENSMUST00000000287 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Acly-201ENSMUST00000007131 4393 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gpsm1-201ENSMUST00000066889 3432 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gal3st2b-202ENSMUST00000178757 2722 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Fam109b-203ENSMUST00000161178 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Cd2bp2-207ENSMUST00000206026 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Gtf3c6Q9D8P7 Gpm6b-204ENSMUST00000112226 3174 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Ubxn10-202ENSMUST00000105810 3304 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Mcf2-204ENSMUST00000228150 3336 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Ikbkg-204ENSMUST00000114128 1867 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Natd1-201ENSMUST00000019075 4179 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Hsd3b1-201ENSMUST00000029465 1663 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Abca7-201ENSMUST00000043866 6590 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Gm24891-201ENSMUST00000104391 136 ntBASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Tnnt3-206ENSMUST00000105944 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Tnnt3-210ENSMUST00000105948 753 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Tnnt3-212ENSMUST00000105950 1037 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Gtf3c6Q9D8P7 Tm2d3-203ENSMUST00000107495 1003 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms