Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Fkbpl-201ENSMUST00000036720 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Sema4d-201ENSMUST00000021900 4482 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC14.89□□□□□ -0.03
U2af1Q9D883 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Hsd17b13-202ENSMUST00000112803 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Slc22a5-201ENSMUST00000019044 3062 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC14.89□□□□□ -0.03
U2af1Q9D883 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Metap2-208ENSMUST00000181091 1876 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
U2af1Q9D883 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm42829-201ENSMUST00000198417 2585 ntBASIC14.88□□□□□ -0.03
U2af1Q9D883 Lpar1-203ENSMUST00000107571 3543 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Ppip5k1-205ENSMUST00000110628 5404 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Znrf3-203ENSMUST00000172492 4926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Pdzd7-203ENSMUST00000169459 3903 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Trim11-202ENSMUST00000108809 3522 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Snord17-201ENSMUST00000104526 238 ntBASIC14.88□□□□□ -0.03
U2af1Q9D883 Xlr4c-204ENSMUST00000114531 1104 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Rpl35a-205ENSMUST00000115079 510 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Igf1-205ENSMUST00000121952 798 ntTSL 3 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm28037-201ENSMUST00000122365 611 ntTSL 3 BASIC14.88□□□□□ -0.03
U2af1Q9D883 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Ddt-202ENSMUST00000172820 574 ntTSL 2 BASIC14.88□□□□□ -0.03
U2af1Q9D883 1700021P04Rik-201ENSMUST00000178667 659 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Mir6407-201ENSMUST00000184510 101 ntBASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm43058-201ENSMUST00000197645 625 ntBASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm43380-201ENSMUST00000200421 220 ntBASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Cdipt-202ENSMUST00000205830 805 ntTSL 2 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Commd4-201ENSMUST00000065358 858 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Rsc1a1-201ENSMUST00000105782 1749 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm21319-201ENSMUST00000164517 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Gm37859-201ENSMUST00000195529 2173 ntBASIC14.88□□□□□ -0.03
U2af1Q9D883 Fopnl-201ENSMUST00000023357 1465 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Rad18-204ENSMUST00000113182 2220 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
U2af1Q9D883 Susd4-201ENSMUST00000085724 2983 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Atp4a-204ENSMUST00000170371 3447 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Rab10os-203ENSMUST00000178074 4006 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
U2af1Q9D883 Crispld2-201ENSMUST00000034282 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm15941-205ENSMUST00000140044 1825 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Pcdhgb7-201ENSMUST00000194928 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Cntd1-201ENSMUST00000103107 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 A530013C23Rik-202ENSMUST00000141923 3489 ntTSL 2 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Prss46-201ENSMUST00000119427 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm12316-201ENSMUST00000125853 406 ntTSL 5 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 Prss46-202ENSMUST00000176403 1257 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm42518-201ENSMUST00000196277 938 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm30946-201ENSMUST00000198288 724 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm42816-201ENSMUST00000198433 325 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC14.87□□□□□ -0.03
U2af1Q9D883 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC14.87□□□□□ -0.03
U2af1Q9D883 AC164618.2-201ENSMUST00000224770 573 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Vmn1r220-201ENSMUST00000072385 897 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Gm2174-201ENSMUST00000079663 402 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Cage1-201ENSMUST00000074969 2856 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Foxl2os-201ENSMUST00000181706 3095 ntTSL 2 BASIC14.87□□□□□ -0.03
U2af1Q9D883 Ttpa-201ENSMUST00000098244 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Gimap5-201ENSMUST00000055558 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 AC155245.1-201ENSMUST00000222266 1804 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 AC167565.1-201ENSMUST00000226980 1833 ntBASIC14.87□□□□□ -0.03
U2af1Q9D883 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
U2af1Q9D883 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
U2af1Q9D883 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 Mad1l1-201ENSMUST00000031534 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 Tex10-206ENSMUST00000164866 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 0610010K14Rik-206ENSMUST00000108576 576 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
U2af1Q9D883 Gm13117-201ENSMUST00000120894 691 ntBASIC14.86□□□□□ -0.03
U2af1Q9D883 Gm11269-201ENSMUST00000157011 595 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 Gm25554-201ENSMUST00000158075 113 ntBASIC14.86□□□□□ -0.03
U2af1Q9D883 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.86□□□□□ -0.03
U2af1Q9D883 Rsph14-206ENSMUST00000166088 1203 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
U2af1Q9D883 Rsph14-207ENSMUST00000179546 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
U2af1Q9D883 Mrip-ps-201ENSMUST00000184613 940 ntBASIC14.86□□□□□ -0.03
U2af1Q9D883 Gm42867-201ENSMUST00000202995 469 ntBASIC14.86□□□□□ -0.03
U2af1Q9D883 Gm45219-201ENSMUST00000205602 465 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms