Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm8399-201ENSMUST00000082300 1117 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Olfr582-201ENSMUST00000098212 960 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Fyco1-202ENSMUST00000167595 7692 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Astn1-205ENSMUST00000193042 7248 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm11661-201ENSMUST00000121761 1327 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Ift88os-201ENSMUST00000149702 2016 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Myo15b-201ENSMUST00000040703 2825 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 6430573F11Rik-203ENSMUST00000147525 5820 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Magee2-201ENSMUST00000033575 2316 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Pkn3-201ENSMUST00000045246 3113 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Csgalnact1-201ENSMUST00000078350 3943 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Ccdc15-204ENSMUST00000216042 1669 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Lgr5-208ENSMUST00000173740 2508 ntTSL 5 BASIC10.22□□□□□ -0.77
Krt88Q9CPR6 Fn1-203ENSMUST00000186129 7797 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Btnl4-201ENSMUST00000065841 1761 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 9330111N05Rik-203ENSMUST00000181508 1848 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Myo18a-223ENSMUST00000169105 6475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Stc2-201ENSMUST00000020546 3940 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Hpcal4-201ENSMUST00000059667 4931 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Fbrs-207ENSMUST00000206394 2961 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 A930016O22Rik-202ENSMUST00000208685 2349 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Eif4g2-206ENSMUST00000161051 3548 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Cacna1f-201ENSMUST00000115725 6028 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Acvrl1-201ENSMUST00000000542 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Prdm16-205ENSMUST00000105637 8595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Prdm16-201ENSMUST00000030902 8598 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm22018-201ENSMUST00000104357 131 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Eif5a-205ENSMUST00000108608 775 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm5940-201ENSMUST00000117582 1068 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 9430021M05Rik-201ENSMUST00000145985 1201 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm5070-201ENSMUST00000177599 862 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm3096-201ENSMUST00000185770 364 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm43133-201ENSMUST00000197472 463 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 C530044C16Rik-202ENSMUST00000205217 1239 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm18054-201ENSMUST00000207539 555 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 AC141438.2-201ENSMUST00000215068 271 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Dhrs2-201ENSMUST00000022820 1268 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Gm7399-201ENSMUST00000032395 858 ntBASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Krt88Q9CPR6 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Olfr1349-204ENSMUST00000207820 1325 ntAPPRIS P1 TSL 3 BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Gm3756-201ENSMUST00000169182 1355 ntBASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Kcnk5-201ENSMUST00000024011 3392 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Sphk2-202ENSMUST00000107737 3548 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Hyal3-201ENSMUST00000040059 1830 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Zfp454-201ENSMUST00000050595 2059 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Slco5a1-202ENSMUST00000115403 8509 ntAPPRIS P2 TSL 5 BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Thoc5-201ENSMUST00000038237 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Gm20715-201ENSMUST00000054781 4460 ntAPPRIS P1 TSL 2 BASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Alms1-ps2-202ENSMUST00000161983 2290 ntBASIC10.21□□□□□ -0.78
Krt88Q9CPR6 Gm43860-201ENSMUST00000201742 2705 ntBASIC10.2□□□□□ -0.78
Krt88Q9CPR6 AC131586.1-201ENSMUST00000228844 2964 ntBASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Sptbn5-204ENSMUST00000156159 3625 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Rnf40-206ENSMUST00000206914 3735 ntTSL 5 BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Cbfa2t3-203ENSMUST00000127984 7645 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Dhx34-204ENSMUST00000121123 3880 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Ugt1a10-201ENSMUST00000113142 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Vezt-202ENSMUST00000118077 2223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
Krt88Q9CPR6 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms