Protein–RNA interactions for Protein: Q99MB1

Tlr3, Toll-like receptor 3, mousemouse

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tlr3Q99MB1 Gm22846-201ENSMUST00000157706 270 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Crhr2-204ENSMUST00000164012 1263 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Mir6958-201ENSMUST00000184207 73 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm9353-201ENSMUST00000200472 604 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm9463-201ENSMUST00000206707 601 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm17825-201ENSMUST00000206836 794 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm10752-201ENSMUST00000218348 729 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 AC148334.1-201ENSMUST00000220853 370 ntTSL 5 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 CT009546.1-201ENSMUST00000222573 1120 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 AC171241.1-201ENSMUST00000228144 1166 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Uqcc1-201ENSMUST00000006036 808 ntTSL 5 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Olfr584-201ENSMUST00000098210 964 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Rnf20-210ENSMUST00000167496 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Tbcel-206ENSMUST00000138506 1534 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Zfp866-202ENSMUST00000137573 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Olfr1413-202ENSMUST00000214239 1724 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Dennd4a-201ENSMUST00000038890 8645 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Fmnl1-202ENSMUST00000042286 3806 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Gm5171-201ENSMUST00000214944 1415 ntBASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Tpst1-202ENSMUST00000118993 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Tlr3Q99MB1 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Akr1c6-201ENSMUST00000021630 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm13561-201ENSMUST00000136879 1826 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Slc45a4-201ENSMUST00000054266 4664 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Myo1h-210ENSMUST00000202006 4631 ntAPPRIS P2 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 D6Ertd527e-201ENSMUST00000170124 2161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Cttnbp2nl-201ENSMUST00000077548 4946 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm4294-201ENSMUST00000105169 614 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm15617-201ENSMUST00000118973 771 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm11246-201ENSMUST00000120880 345 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm4726-201ENSMUST00000135604 736 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm6019-201ENSMUST00000148369 736 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm7535-201ENSMUST00000164167 909 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Mrpl23-ps1-201ENSMUST00000173086 580 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm29155-201ENSMUST00000185910 269 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm17831-201ENSMUST00000205579 900 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gng8-204ENSMUST00000205716 432 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Olfr567-ps1-201ENSMUST00000210349 857 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm4797-201ENSMUST00000219075 1283 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 CT025551.1-201ENSMUST00000223996 692 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Sat1-201ENSMUST00000026318 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Gm13135-201ENSMUST00000117628 3121 ntBASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Nfx1-202ENSMUST00000091614 3617 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Zfp609-201ENSMUST00000159109 7777 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Dync1i2-208ENSMUST00000112144 2565 ntAPPRIS ALT1 TSL 5 BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Myh6-201ENSMUST00000081857 6113 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Tctn1-201ENSMUST00000111738 5717 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Scoc-202ENSMUST00000167525 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Tlr3Q99MB1 Smc3-201ENSMUST00000025930 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm35850-202ENSMUST00000211705 2120 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Chd3-202ENSMUST00000108661 7261 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Prag1-201ENSMUST00000110492 4780 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Ltbp1-202ENSMUST00000112514 4870 ntAPPRIS ALT1 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm11956-201ENSMUST00000119525 512 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm11836-201ENSMUST00000121022 441 ntBASIC12.17□□□□□ -0.46
Tlr3Q99MB1 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 1700088E04Rik-201ENSMUST00000169604 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Tlr3Q99MB1 Gm37981-201ENSMUST00000194280 535 ntBASIC12.17□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms