Protein–RNA interactions for Protein: Q8VCE1

Dnajc28, DnaJ homolog subfamily C member 28, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dnajc28Q8VCE1 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Krt33a-201ENSMUST00000018399 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm21358-201ENSMUST00000191645 1659 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gpr139-201ENSMUST00000084650 4843 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Spdye4a-203ENSMUST00000195900 1496 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm10479-201ENSMUST00000101568 318 ntAPPRIS P1 TSL 5 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Polr2i-203ENSMUST00000108193 488 ntTSL 3 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm14219-201ENSMUST00000120414 288 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm23218-201ENSMUST00000158124 276 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Fam166b-206ENSMUST00000171134 1198 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Pfdn6-202ENSMUST00000173363 871 ntTSL 2 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm6114-201ENSMUST00000182472 968 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Mir6407-201ENSMUST00000184510 101 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Rbp2-202ENSMUST00000187905 611 ntAPPRIS P1 TSL 3 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm7972-202ENSMUST00000208453 505 ntTSL 3 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm11149-203ENSMUST00000215465 805 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm3619-201ENSMUST00000219947 775 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 AC165154.1-201ENSMUST00000226661 340 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Wnt7b-203ENSMUST00000167968 3408 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 D130043K22Rik-201ENSMUST00000006893 4973 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Nfe2l1-211ENSMUST00000167149 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Golga2-202ENSMUST00000100194 4373 ntAPPRIS P4 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm15446-201ENSMUST00000112544 2417 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Arhgef2-207ENSMUST00000175903 3356 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gm43622-201ENSMUST00000200140 2019 ntBASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Usp44-201ENSMUST00000095333 2946 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Gck-201ENSMUST00000102920 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Dnajc28Q8VCE1 Wdr82-201ENSMUST00000020490 3747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Cyp26b1-204ENSMUST00000204146 4495 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Dcaf11-202ENSMUST00000117236 2538 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Cipc-208ENSMUST00000189246 1454 ntAPPRIS P2 TSL 2 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Nrde2-201ENSMUST00000021596 3718 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Foxp1-221ENSMUST00000176632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Foxp1-222ENSMUST00000176850 2339 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Ckmt1-201ENSMUST00000000317 1620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Nudt6-203ENSMUST00000108117 879 ntTSL 5 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Myl2-203ENSMUST00000111751 889 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Tbata-203ENSMUST00000121297 1000 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Gm10807-201ENSMUST00000177134 795 ntBASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Gm5982-201ENSMUST00000196234 512 ntBASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Nras-208ENSMUST00000200069 831 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Gm31597-201ENSMUST00000211176 515 ntTSL 2 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Cplx3-203ENSMUST00000217015 540 ntTSL 2 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Them5-201ENSMUST00000029794 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Olfr1047-201ENSMUST00000099901 960 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Axl-201ENSMUST00000002677 4265 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Nubp2-201ENSMUST00000044252 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Gcc1-202ENSMUST00000090511 4650 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Calm1-201ENSMUST00000001204 3987 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Ces5a-203ENSMUST00000212009 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Dnajc28Q8VCE1 Cacna1c-212ENSMUST00000187940 7507 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Kat7-203ENSMUST00000103159 3248 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Trpv4-205ENSMUST00000112225 3226 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gdap2-201ENSMUST00000029459 3008 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Lmo7-205ENSMUST00000159314 5774 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Tie1-201ENSMUST00000047421 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Spg20-202ENSMUST00000107971 3567 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm12247-201ENSMUST00000117585 670 ntBASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm15172-201ENSMUST00000118945 1046 ntBASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Rnf181-212ENSMUST00000154098 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Rxra-206ENSMUST00000166775 3216 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm20442-201ENSMUST00000174630 492 ntTSL 3 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm17798-201ENSMUST00000182282 1035 ntBASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Fndc8-201ENSMUST00000018988 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 1700008A23Rik-201ENSMUST00000191694 691 ntBASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm37800-202ENSMUST00000193667 553 ntTSL 3 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm43001-201ENSMUST00000198925 603 ntTSL 3 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Gm44759-201ENSMUST00000206057 430 ntTSL 3 BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Metap2-201ENSMUST00000047910 4424 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Dnajc28Q8VCE1 Cd300lf-201ENSMUST00000051264 1864 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.1 ms