Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Entpd4-201ENSMUST00000064831 1842 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Unk-201ENSMUST00000021116 3735 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Adgrg5-201ENSMUST00000074570 2802 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Plpbp-201ENSMUST00000033875 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Ntm-201ENSMUST00000075069 3022 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Nfatc4-202ENSMUST00000172271 3775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
Chmp7Q8R1T1 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm37269-201ENSMUST00000193906 1891 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 1700036A12Rik-202ENSMUST00000190053 1828 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Ttbk2-203ENSMUST00000085840 11152 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Acat1-201ENSMUST00000034547 3405 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Anxa3-205ENSMUST00000198631 1523 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm33831-201ENSMUST00000211696 1542 ntTSL 5 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm45416-201ENSMUST00000209713 2201 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm23612-201ENSMUST00000103823 110 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm12712-201ENSMUST00000120676 801 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm11502-201ENSMUST00000120917 1211 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Saxo2-202ENSMUST00000126478 430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Polr3c-205ENSMUST00000141377 808 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Adora3-202ENSMUST00000164730 1219 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm23576-201ENSMUST00000179918 110 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm19013-201ENSMUST00000183895 1222 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm19014-201ENSMUST00000184828 1189 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm18801-201ENSMUST00000186616 536 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 1700081H04Rik-201ENSMUST00000190550 1128 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Gm42867-201ENSMUST00000202995 469 ntBASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Nnmt-201ENSMUST00000034808 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Dnaic2-202ENSMUST00000092469 2799 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Spata7-201ENSMUST00000048402 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Fbxo18-201ENSMUST00000071564 3567 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Chmp7Q8R1T1 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Lta-201ENSMUST00000025266 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Yeats2-202ENSMUST00000115560 6116 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Alox5-202ENSMUST00000164547 1854 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Styxl1-203ENSMUST00000111162 726 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Il1rn-202ENSMUST00000114485 728 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm12943-201ENSMUST00000119616 210 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm15196-201ENSMUST00000121406 482 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm3828-201ENSMUST00000121817 257 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm13802-201ENSMUST00000150159 663 ntTSL 3 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Fxyd5-209ENSMUST00000162087 762 ntAPPRIS P3 TSL 3 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm5529-201ENSMUST00000165691 891 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm3250-201ENSMUST00000167358 693 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm3238-201ENSMUST00000168298 693 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm9372-201ENSMUST00000168454 430 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 2410002F23Rik-220ENSMUST00000191537 872 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Klk1b15-ps-201ENSMUST00000206273 715 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 3110009M11Rik-201ENSMUST00000208647 892 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm4903-201ENSMUST00000210462 405 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 AC165249.1-202ENSMUST00000217990 734 ntTSL 3 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm46224-201ENSMUST00000220221 1242 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 AC102847.1-202ENSMUST00000226313 1245 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Olfr525-201ENSMUST00000078103 1050 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Uqcc3-201ENSMUST00000096253 829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Dmbt1-206ENSMUST00000213064 5779 ntTSL 5 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Chd7-201ENSMUST00000039267 9444 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Gm43152-201ENSMUST00000202495 1638 ntBASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 4930465M20Rik-201ENSMUST00000130564 1446 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Atxn2l-203ENSMUST00000167759 4023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Acin1-221ENSMUST00000150371 2494 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Apold1-201ENSMUST00000167323 3567 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 Mafb-201ENSMUST00000099126 3363 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Chmp7Q8R1T1 1700123L14Rik-201ENSMUST00000090061 1747 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Gfap-201ENSMUST00000067444 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Ephb2-203ENSMUST00000105846 3653 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 3110062M04Rik-201ENSMUST00000055097 3681 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Plxna1-201ENSMUST00000049845 5810 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Rgr-203ENSMUST00000225070 4704 ntBASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Chmp7Q8R1T1 Mphosph10-201ENSMUST00000032735 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 108.5 ms