Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Clrn1Q8K445 Uba6-202ENSMUST00000113373 3504 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Tmem129-201ENSMUST00000019439 2828 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Sult1a1-201ENSMUST00000106371 1370 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Sult1a1-202ENSMUST00000106372 1369 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Lgals8-201ENSMUST00000099820 2736 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Nrros-202ENSMUST00000115163 3559 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Pdzk1-202ENSMUST00000107069 2219 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm21998-201ENSMUST00000117552 1308 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm28424-201ENSMUST00000187393 1319 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Ewsr1-201ENSMUST00000063232 1320 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Btrc-209ENSMUST00000224478 2194 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Slc10a3-204ENSMUST00000114147 1708 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Llgl1-202ENSMUST00000108719 4268 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Tcf7l2-206ENSMUST00000111652 1041 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Cetn2-203ENSMUST00000114551 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm15725-201ENSMUST00000119947 1090 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm11244-201ENSMUST00000121243 237 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm20426-201ENSMUST00000173657 440 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Creb1-209ENSMUST00000190348 1260 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm37981-201ENSMUST00000194280 535 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm17825-201ENSMUST00000206836 794 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 4933424G06Rik-204ENSMUST00000208994 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 CT009546.1-201ENSMUST00000222573 1120 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Rnf183-201ENSMUST00000079420 573 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Pck2-207ENSMUST00000226519 4625 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Lrrc36-201ENSMUST00000067305 2082 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Rad51c-201ENSMUST00000007790 1632 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Camkv-204ENSMUST00000194206 2827 ntTSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm37849-201ENSMUST00000194722 1881 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Fry-201ENSMUST00000087204 10893 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.68□□□□□ -0.7
Clrn1Q8K445 Atp6v1d-201ENSMUST00000021536 3667 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Clrn1Q8K445 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Nhsl1-201ENSMUST00000037341 7321 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Tnip1-202ENSMUST00000102730 2787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Mcam-202ENSMUST00000098852 2772 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Tiam1-204ENSMUST00000114124 7406 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm13328-201ENSMUST00000120816 1020 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm12446-201ENSMUST00000123933 798 ntTSL 3 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Olfml3-204ENSMUST00000169286 874 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Mir5132-201ENSMUST00000175166 71 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm4654-201ENSMUST00000183305 982 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 1700029J03Rik-201ENSMUST00000185803 789 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 4930422M22Rik-201ENSMUST00000191492 948 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm43138-201ENSMUST00000199123 708 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm9353-201ENSMUST00000200472 604 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Olfr584-201ENSMUST00000098210 964 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Olfr1250-201ENSMUST00000099768 1139 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Tmem41b-202ENSMUST00000118429 2774 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Dusp10-201ENSMUST00000048655 2792 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Cep250-204ENSMUST00000109619 7977 ntAPPRIS P4 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Snx13-202ENSMUST00000163677 3681 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Srsf5-201ENSMUST00000094693 1527 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gsdmc2-202ENSMUST00000188404 2078 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Rab3gap2-204ENSMUST00000194740 4418 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Gm43289-201ENSMUST00000200537 1475 ntBASIC10.67□□□□□ -0.7
Clrn1Q8K445 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Sec14l1-202ENSMUST00000090433 4654 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Glyctk-202ENSMUST00000112543 4081 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Clrn1Q8K445 Tyk2-201ENSMUST00000001036 4619 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms