Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Papln-202ENSMUST00000121733 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cchcr1Q8K2I2 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Cchcr1Q8K2I2 Htr1f-201ENSMUST00000063076 2509 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Cchcr1Q8K2I2 Rnf165-202ENSMUST00000182024 4309 ntTSL 5 BASIC13.4□□□□□ -0.27
Cchcr1Q8K2I2 Tubgcp6-201ENSMUST00000041656 5357 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.27
Cchcr1Q8K2I2 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm31816-202ENSMUST00000209591 1332 ntTSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Dhx38-201ENSMUST00000042601 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Aldh16a1-206ENSMUST00000209963 3537 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Zim1-203ENSMUST00000203908 1740 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Enox1-203ENSMUST00000227662 3064 ntAPPRIS ALT2 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Ktn1-220ENSMUST00000190252 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Dnajc5-203ENSMUST00000108797 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Sel1l-201ENSMUST00000021347 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Klhl29-202ENSMUST00000218384 2716 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Rap1gap-201ENSMUST00000047243 3247 ntAPPRIS P3 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Ighv1-81-201ENSMUST00000103548 351 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm13035-201ENSMUST00000117496 342 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm16481-201ENSMUST00000119074 1227 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm8876-201ENSMUST00000120768 1122 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm15566-201ENSMUST00000121130 590 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm2260-201ENSMUST00000184965 657 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm42682-201ENSMUST00000198349 1265 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 AU022133-201ENSMUST00000200601 873 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm5996-201ENSMUST00000211110 718 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Ntng1-201ENSMUST00000051253 327 ntBASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Dscaml1-201ENSMUST00000034592 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Cic-212ENSMUST00000169266 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Epb41l1-201ENSMUST00000029155 6220 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Vasn-201ENSMUST00000038770 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 9430015G10Rik-201ENSMUST00000072554 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Ccdc191-201ENSMUST00000122014 1822 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Kcnmb3-201ENSMUST00000164954 1715 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm19299-202ENSMUST00000215724 1435 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC13.39□□□□□ -0.27
Cchcr1Q8K2I2 D130051D11Rik-201ENSMUST00000189171 6188 ntBASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Cnot8-202ENSMUST00000108843 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Tab1-201ENSMUST00000023050 2931 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 4933424N20Rik-201ENSMUST00000200749 1463 ntBASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Gpr161-201ENSMUST00000111450 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 9530082P21Rik-203ENSMUST00000181605 3162 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Gm16066-201ENSMUST00000118575 1086 ntTSL 3 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 1700037C06Rik-201ENSMUST00000132824 874 ntBASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Spdye4c-203ENSMUST00000178601 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Gm6905-201ENSMUST00000205729 511 ntBASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Krtap19-5-201ENSMUST00000053460 483 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Gm43622-201ENSMUST00000200140 2019 ntBASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Krt7-201ENSMUST00000068904 4094 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 6030443J06Rik-201ENSMUST00000181209 2380 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Csgalnact1-203ENSMUST00000130214 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Gm6793-201ENSMUST00000071732 1604 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Actl7a-201ENSMUST00000095079 1513 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Maml3-202ENSMUST00000121440 8288 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Cchcr1Q8K2I2 AC122273.1-201ENSMUST00000213634 2327 ntBASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms