Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Spx-202ENSMUST00000126521 357 ntAPPRIS P2 TSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm10051-201ENSMUST00000145209 414 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm22902-201ENSMUST00000158488 302 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm10320-201ENSMUST00000170205 527 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm8546-201ENSMUST00000178288 1264 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm37986-201ENSMUST00000193285 383 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm44100-201ENSMUST00000204329 436 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm18165-201ENSMUST00000217426 928 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Olfr624-201ENSMUST00000062144 5731 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Eps8l2-201ENSMUST00000026577 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Stard4-201ENSMUST00000025236 5097 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Bdkrb2-201ENSMUST00000001652 3792 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Tubgcp4-201ENSMUST00000039541 4206 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Zfp41-204ENSMUST00000161785 3540 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Gm29895-201ENSMUST00000209933 5652 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 CT010498.2-201ENSMUST00000225690 1659 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Mcf2l-222ENSMUST00000173099 6081 ntTSL 5 BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 Taf9b-201ENSMUST00000055497 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Rfwd3Q8CIK8 A430028G04Rik-201ENSMUST00000219095 1973 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 AU015791-201ENSMUST00000223443 1457 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Tfr2-201ENSMUST00000031729 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Mical3-217ENSMUST00000207889 9204 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Nr4a2-202ENSMUST00000112627 2400 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Spata31d1a-203ENSMUST00000224982 5325 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Mob4-205ENSMUST00000162364 2840 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Armc9-201ENSMUST00000027434 5127 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gusb-201ENSMUST00000026613 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Nr5a2-205ENSMUST00000192929 1756 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm45576-201ENSMUST00000210981 1322 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Spop-201ENSMUST00000107722 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Thrap3-201ENSMUST00000080919 4378 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Timd4-201ENSMUST00000068877 2173 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Itgb1bp1-206ENSMUST00000173729 1701 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm37422-201ENSMUST00000193794 4718 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Olfr1344-202ENSMUST00000218906 2590 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Mup-ps26-201ENSMUST00000121751 202 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm8737-201ENSMUST00000122208 642 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Ighv5-11-201ENSMUST00000193354 371 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm43852-201ENSMUST00000202098 917 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm35549-201ENSMUST00000203176 735 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm17831-201ENSMUST00000205579 900 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm2517-201ENSMUST00000215651 348 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 AC154276.3-201ENSMUST00000227643 998 ntBASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Phxr2-201ENSMUST00000060761 1159 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Vmn1r222-201ENSMUST00000077116 1054 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Akap12-202ENSMUST00000215696 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Pfkfb2-208ENSMUST00000187089 1690 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Olfr541-203ENSMUST00000210357 1642 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Tef-202ENSMUST00000109553 4401 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Ces2a-201ENSMUST00000034346 1960 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Acsl6-202ENSMUST00000064690 1988 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Ankrd31-203ENSMUST00000208758 5859 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 B4galt4-201ENSMUST00000023482 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Tcof1-202ENSMUST00000175934 4595 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Lrrc74b-202ENSMUST00000065125 1539 ntTSL 2 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Kifc5b-201ENSMUST00000078961 2627 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 S100pbp-203ENSMUST00000106059 4084 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Gm2464-201ENSMUST00000180838 2551 ntTSL 5 BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Rfwd3Q8CIK8 4930488L21Rik-201ENSMUST00000181864 3244 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Apc-203ENSMUST00000115781 12346 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Dcaf8-202ENSMUST00000191689 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Ephx1-201ENSMUST00000036928 1741 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Sertm1-201ENSMUST00000070342 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Nipbl-201ENSMUST00000052965 8815 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Slco2a1-201ENSMUST00000035148 7122 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Golga2-203ENSMUST00000113377 4361 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Vcp-201ENSMUST00000030164 3316 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Rfwd3Q8CIK8 Gprc5d-202ENSMUST00000111922 1317 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms