Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Gm36975-201ENSMUST00000194105 1828 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Spag6-201ENSMUST00000095132 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm14740-201ENSMUST00000118538 1150 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12616-201ENSMUST00000118594 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm15131-201ENSMUST00000119124 595 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12029-201ENSMUST00000120073 832 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Dusp13-204ENSMUST00000120984 976 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Srrm3os-201ENSMUST00000131896 1271 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm13449-201ENSMUST00000153559 1231 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 H2-M2-202ENSMUST00000171139 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12624-201ENSMUST00000177615 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12621-201ENSMUST00000177760 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12615-201ENSMUST00000177970 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12622-201ENSMUST00000177975 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12627-201ENSMUST00000178412 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm21778-201ENSMUST00000178779 471 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12625-201ENSMUST00000179122 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12614-201ENSMUST00000179586 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm12613-201ENSMUST00000180323 382 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm43520-201ENSMUST00000197996 164 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm8615-202ENSMUST00000201946 737 ntTSL 3 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm36355-201ENSMUST00000203752 639 ntTSL 3 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Nt5dc1-206ENSMUST00000213269 802 ntTSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 AC027700.1-201ENSMUST00000213965 370 ntTSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 C330004P14Rik-201ENSMUST00000218833 628 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 AC155712.2-201ENSMUST00000220398 643 ntTSL 3 BASIC11.91□□□□□ -0.5
Uba3Q8C878 AC154680.1-201ENSMUST00000224376 859 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 AC159002.1-201ENSMUST00000226714 924 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Snora73b-201ENSMUST00000083419 205 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Gm2128-201ENSMUST00000108009 2560 ntBASIC11.91□□□□□ -0.5
Uba3Q8C878 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Actr1a-201ENSMUST00000040270 2742 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Mmp19-203ENSMUST00000219404 2236 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Ankrd53-201ENSMUST00000014891 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Tiparp-201ENSMUST00000047906 4191 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Wif1-203ENSMUST00000175867 2183 ntTSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Inpp4a-211ENSMUST00000168546 2964 ntTSL 5 BASIC11.91□□□□□ -0.5
Uba3Q8C878 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Oc90-202ENSMUST00000079776 1670 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Uba3Q8C878 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Smndc1-201ENSMUST00000025997 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Gcn1l1-201ENSMUST00000064454 8555 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Zmat1-201ENSMUST00000064659 3501 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Auts2-209ENSMUST00000161804 5392 ntAPPRIS P5 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Usp22-201ENSMUST00000041683 4434 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 3110062M04Rik-203ENSMUST00000115007 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Sec22b-201ENSMUST00000029476 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Gm14263-201ENSMUST00000117955 746 ntBASIC11.9□□□□□ -0.5
Uba3Q8C878 Gm14942-201ENSMUST00000119642 336 ntBASIC11.9□□□□□ -0.5
Uba3Q8C878 Gm14395-201ENSMUST00000120494 563 ntBASIC11.9□□□□□ -0.5
Uba3Q8C878 Gm11457-203ENSMUST00000146846 676 ntTSL 3 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Tro-208ENSMUST00000164071 891 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Mir7051-201ENSMUST00000184167 73 ntBASIC11.9□□□□□ -0.5
Uba3Q8C878 Gm29067-201ENSMUST00000190821 470 ntBASIC11.9□□□□□ -0.5
Uba3Q8C878 Fam168a-204ENSMUST00000207564 1083 ntTSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 AC135469.1-201ENSMUST00000225984 772 ntBASIC11.9□□□□□ -0.5
Uba3Q8C878 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Fpr-rs3-201ENSMUST00000071189 1032 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Tas2r125-201ENSMUST00000076119 937 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Ccdc97-201ENSMUST00000002683 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Cyb5b-201ENSMUST00000034400 4316 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Popdc2-202ENSMUST00000114739 1992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC11.9□□□□□ -0.5
Uba3Q8C878 Ttc25-201ENSMUST00000006976 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
Uba3Q8C878 Fam120b-201ENSMUST00000055352 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Uba3Q8C878 Nom1-201ENSMUST00000001611 9219 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Uba3Q8C878 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
Uba3Q8C878 Adamts14-202ENSMUST00000120336 3645 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.51
Uba3Q8C878 Zfp85os-202ENSMUST00000143812 1784 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
Uba3Q8C878 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.51
Uba3Q8C878 Ptgir-202ENSMUST00000144408 3305 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Tspan14-202ENSMUST00000224209 2477 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
Uba3Q8C878 Smarca2-216ENSMUST00000176769 5703 ntTSL 5 BASIC11.89□□□□□ -0.51
Uba3Q8C878 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Evi2a-201ENSMUST00000103236 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Gm21136-201ENSMUST00000186812 2575 ntBASIC11.89□□□□□ -0.51
Uba3Q8C878 Gm6605-201ENSMUST00000031488 2574 ntBASIC11.89□□□□□ -0.51
Uba3Q8C878 Jmjd4-202ENSMUST00000108777 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Uba3Q8C878 Mcm2-201ENSMUST00000058011 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms