Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Ehd2-201ENSMUST00000098799 5119 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cpsf4Q8BQZ5 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC11□□□□□ -0.65
Cpsf4Q8BQZ5 Coro6-202ENSMUST00000052515 1476 ntTSL 1 (best) BASIC11□□□□□ -0.65
Cpsf4Q8BQZ5 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Cpsf4Q8BQZ5 Kdm3a-202ENSMUST00000167220 4853 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Cpsf4Q8BQZ5 Tom1l2-206ENSMUST00000102683 4999 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm6560-201ENSMUST00000198588 1591 ntBASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Tmem161a-201ENSMUST00000002413 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm5380-201ENSMUST00000119296 2136 ntBASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13408-201ENSMUST00000119822 798 ntBASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Timm22-202ENSMUST00000120699 746 ntTSL 3 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13935-201ENSMUST00000121859 798 ntBASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm3948-201ENSMUST00000147795 421 ntTSL 3 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 4930557F10Rik-201ENSMUST00000155432 630 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 1810020O05Rik-201ENSMUST00000162547 1047 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Qdpr-209ENSMUST00000198258 1172 ntTSL 5 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm45909-201ENSMUST00000212413 1031 ntBASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm45781-201ENSMUST00000212860 539 ntTSL 5 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 AC154537.1-201ENSMUST00000226101 1304 ntBASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Ddo-202ENSMUST00000213442 2408 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Prrxl1-204ENSMUST00000189022 2985 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Spag16-202ENSMUST00000113940 3559 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Crym-201ENSMUST00000033198 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Slc23a2-201ENSMUST00000028815 6364 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Ceacam18-201ENSMUST00000032663 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 1600014C10Rik-201ENSMUST00000067854 3143 ntAPPRIS P1 TSL 5 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Art3-202ENSMUST00000117108 1408 ntAPPRIS ALT2 TSL 5 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Art3-203ENSMUST00000118106 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 4931429L15Rik-201ENSMUST00000159565 2037 ntAPPRIS P1 TSL 2 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Fxr1-206ENSMUST00000198051 2127 ntTSL 5 BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Rad17-201ENSMUST00000022136 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Chit1-203ENSMUST00000160060 1580 ntTSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Ctsb-201ENSMUST00000006235 4743 ntAPPRIS P1 TSL 1 (best) BASIC10.99□□□□□ -0.65
Cpsf4Q8BQZ5 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Fkbp15-204ENSMUST00000107461 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Tpp2-201ENSMUST00000087933 4649 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Vcan-202ENSMUST00000109544 5702 ntTSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Steap3-201ENSMUST00000112639 2931 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 1700080O16Rik-202ENSMUST00000114866 1232 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13916-201ENSMUST00000117368 628 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Rpl19-ps1-201ENSMUST00000121059 591 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13263-201ENSMUST00000121271 838 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Mir1943-201ENSMUST00000158276 73 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm17231-202ENSMUST00000165858 663 ntTSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Smyd1-205ENSMUST00000173297 947 ntTSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm8815-201ENSMUST00000173809 620 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 1110059E24Rik-208ENSMUST00000179768 962 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm9866-204ENSMUST00000183238 351 ntTSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm10774-201ENSMUST00000188689 204 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Mir7686-201ENSMUST00000200604 57 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm6905-201ENSMUST00000205729 511 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm13522-202ENSMUST00000209682 997 ntTSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm7395-201ENSMUST00000216059 1045 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm18065-201ENSMUST00000221395 526 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 B230303A05Rik-204ENSMUST00000223006 748 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm14267-206ENSMUST00000226870 1209 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Itga11-201ENSMUST00000034774 4969 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Gm37014-201ENSMUST00000194723 2253 ntBASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 C1qtnf3-201ENSMUST00000022853 2338 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Pisd-ps2-201ENSMUST00000127960 1424 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Cabin1-201ENSMUST00000001712 7417 ntAPPRIS P1 TSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Egfem1-202ENSMUST00000119598 2687 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 1110059E24Rik-201ENSMUST00000038830 1614 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Acsl4-201ENSMUST00000033634 5280 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Abhd12b-203ENSMUST00000169156 1775 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
Cpsf4Q8BQZ5 Tmem134-216ENSMUST00000171743 3701 ntTSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Gm5608-201ENSMUST00000210253 2290 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Slc6a5-202ENSMUST00000107605 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Trip4-202ENSMUST00000119245 4211 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
Cpsf4Q8BQZ5 Mettl14-204ENSMUST00000174323 4202 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 35.1 ms