Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 A630075F10Rik-201ENSMUST00000180895 1913 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Fbxo25-204ENSMUST00000209913 2035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Trpc2-201ENSMUST00000124189 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Slurp1-202ENSMUST00000190433 2859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm11979-201ENSMUST00000119629 743 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm14165-201ENSMUST00000121456 952 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm25545-201ENSMUST00000122673 323 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Marcksl1-ps4-201ENSMUST00000132531 291 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Rps19-ps10-201ENSMUST00000159750 435 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Mir6923-201ENSMUST00000184592 72 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 1700109G14Rik-202ENSMUST00000188538 754 ntTSL 3 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 9530034A14Rik-201ENSMUST00000197919 1083 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm35960-201ENSMUST00000202712 767 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Fcer2a-206ENSMUST00000208438 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Fcer2a-208ENSMUST00000208603 930 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm18035-201ENSMUST00000211962 589 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm4657-201ENSMUST00000213839 787 ntTSL 3 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Myoz2-201ENSMUST00000029761 1181 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Ddx17-201ENSMUST00000054014 4761 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Dtx1-201ENSMUST00000031607 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Prkag3-201ENSMUST00000081636 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Fn3krp-201ENSMUST00000038096 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Slc4a3-202ENSMUST00000124341 7182 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm13404-201ENSMUST00000156633 1960 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Gm18986-201ENSMUST00000216029 1986 ntBASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Tmem8b-201ENSMUST00000107864 4726 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Vat1l-201ENSMUST00000049509 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Smarcal1Q8BJL0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Tcf25-202ENSMUST00000108840 2582 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Ddah1-202ENSMUST00000120310 2291 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Duxf3-201ENSMUST00000174056 1486 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Pde4b-206ENSMUST00000106907 1374 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm4917-201ENSMUST00000121452 650 ntBASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Cfap100-204ENSMUST00000134224 849 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Ins2-208ENSMUST00000162317 297 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Prdx2-208ENSMUST00000164807 1175 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm37365-201ENSMUST00000193109 409 ntBASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm2762-206ENSMUST00000202502 335 ntTSL 3 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm2762-208ENSMUST00000202976 568 ntTSL 3 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm9102-201ENSMUST00000219250 465 ntBASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Retnla-201ENSMUST00000023329 598 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Olfr71-201ENSMUST00000055401 939 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Trim25-203ENSMUST00000107896 5590 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Cers6-201ENSMUST00000028426 7038 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Tcn2-203ENSMUST00000109989 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Strc-201ENSMUST00000038389 5756 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Rps9-202ENSMUST00000108623 1347 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Gm43760-201ENSMUST00000202120 3015 ntBASIC12.11□□□□□ -0.47
Smarcal1Q8BJL0 Rnf17-201ENSMUST00000095793 5264 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Slc38a5-203ENSMUST00000115591 1853 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Grap2-201ENSMUST00000043149 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 1500004A13Rik-209ENSMUST00000185189 1659 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Zrsr2-201ENSMUST00000090840 3867 ntTSL 2 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm5308-201ENSMUST00000196752 1354 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm9544-201ENSMUST00000223349 2482 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm25562-201ENSMUST00000104608 133 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Gm14398-201ENSMUST00000117287 1073 ntBASIC12.1□□□□□ -0.47
Smarcal1Q8BJL0 Apoc3-202ENSMUST00000118649 453 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms