Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 AC118639.2-201ENSMUST00000226289 223 ntBASIC11.15□□□□□ -0.62
Ccdc116Q80X53 AC125539.1-201ENSMUST00000227423 622 ntBASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Amtn-201ENSMUST00000073363 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Gm10681-202ENSMUST00000178221 1605 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Gm12153-201ENSMUST00000148504 2509 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Cd55-201ENSMUST00000027650 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Pou6f1-201ENSMUST00000058274 2523 ntTSL 2 BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 AC122273.1-201ENSMUST00000213634 2327 ntBASIC11.15□□□□□ -0.62
Ccdc116Q80X53 U2af1l4-237ENSMUST00000167042 3007 ntAPPRIS P5 TSL 2 BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Col15a1-203ENSMUST00000107730 1755 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Kpna7-202ENSMUST00000110673 2453 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Zdhhc6-205ENSMUST00000224291 2603 ntBASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Nudt13-207ENSMUST00000224311 1574 ntBASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Crot-201ENSMUST00000003720 2996 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Ccdc116Q80X53 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc116Q80X53 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc116Q80X53 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc116Q80X53 Rai2-201ENSMUST00000061514 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Ccdc116Q80X53 Exoc4-203ENSMUST00000115080 2369 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm12532-201ENSMUST00000148448 2684 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Kcnj5-201ENSMUST00000034533 4685 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Platr6-201ENSMUST00000180731 1818 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 AC155245.1-201ENSMUST00000222266 1804 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Slc38a5-202ENSMUST00000115590 1983 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Cxcl12-203ENSMUST00000112871 3132 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Tnfaip3-201ENSMUST00000019997 4422 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Zbtb45-205ENSMUST00000210282 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Saxo2-201ENSMUST00000056728 2783 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Pigq-219ENSMUST00000208071 2926 ntAPPRIS ALT2 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 AC174797.1-201ENSMUST00000224339 1649 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm14397-201ENSMUST00000124728 576 ntTSL 3 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm15346-201ENSMUST00000143638 475 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm9353-201ENSMUST00000200472 604 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm6108-201ENSMUST00000208365 367 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Proz-203ENSMUST00000211363 984 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm4065-201ENSMUST00000218715 763 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 4930423D24Rik-202ENSMUST00000219785 554 ntTSL 5 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 5830428M24Rik-201ENSMUST00000221805 825 ntTSL 2 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 AC134860.1-201ENSMUST00000224867 660 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 CT009713.8-201ENSMUST00000225448 560 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm26226-201ENSMUST00000082509 116 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 H2-M3-201ENSMUST00000038580 1438 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Swap70-201ENSMUST00000033325 4027 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Sept9-203ENSMUST00000100193 2924 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm6903-201ENSMUST00000160509 1366 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Adora1-203ENSMUST00000169927 4581 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Gm37160-201ENSMUST00000193081 1689 ntBASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 BC027072-201ENSMUST00000057405 5004 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Odf2l-204ENSMUST00000106192 2425 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Flad1-204ENSMUST00000129308 2892 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
Ccdc116Q80X53 Elf2-206ENSMUST00000163748 2656 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Jam3-201ENSMUST00000034472 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Gm26660-202ENSMUST00000223620 4112 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Trim56-201ENSMUST00000054384 9279 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Sept9-202ENSMUST00000093907 3616 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Sephs1-201ENSMUST00000027973 5319 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Tmem151a-201ENSMUST00000077066 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 Ror2-202ENSMUST00000130235 3730 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Ccdc116Q80X53 AC122291.1-201ENSMUST00000228937 5748 ntBASIC11.13□□□□□ -0.63
Ccdc116Q80X53 C2cd5-203ENSMUST00000171349 4292 ntAPPRIS P1 TSL 5 BASIC11.13□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 122.1 ms