Protein–RNA interactions for Protein: Q80SY5

Prpf38b, Pre-mRNA-splicing factor 38B, mousemouse

Known RBP Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38bQ80SY5 Gm43172-201ENSMUST00000202139 2137 ntBASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Gm5641-201ENSMUST00000091130 1488 ntBASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Ica1-204ENSMUST00000115520 1876 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Carmil1-201ENSMUST00000072889 4988 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Prpf38bQ80SY5 Rapgef3-203ENSMUST00000126854 4005 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Zfp112-204ENSMUST00000215113 2628 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm17746-201ENSMUST00000223429 3772 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Opn1mw-202ENSMUST00000101457 1233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Rpl7a-201ENSMUST00000102898 914 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm13965-201ENSMUST00000154834 576 ntTSL 3 BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm17116-201ENSMUST00000169175 1013 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Rhox5-201ENSMUST00000179626 633 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Mir6407-201ENSMUST00000184510 101 ntBASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm28064-201ENSMUST00000185639 858 ntBASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm37612-201ENSMUST00000193626 582 ntTSL 5 BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Mrpl30-207ENSMUST00000195373 587 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm18711-201ENSMUST00000199341 750 ntBASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm3017-201ENSMUST00000203603 1126 ntBASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 CT030135.2-201ENSMUST00000225255 893 ntBASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Ensa-202ENSMUST00000058230 1130 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm10775-201ENSMUST00000099425 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Runx3-201ENSMUST00000056977 3884 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Edc4-202ENSMUST00000119261 4645 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Srebf1-201ENSMUST00000020846 4299 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 5033403F01Rik-201ENSMUST00000181376 1678 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Hnrnpm-206ENSMUST00000148178 3934 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Pla2g4a-202ENSMUST00000111926 2835 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Cdrt4os1-201ENSMUST00000130177 2090 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm16237-201ENSMUST00000156666 1319 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Cpsf4l-202ENSMUST00000100248 1375 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Gm18782-201ENSMUST00000209023 1399 ntBASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Reps1-201ENSMUST00000126390 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Hsd3b6-201ENSMUST00000029463 1802 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Cry2-201ENSMUST00000090559 3976 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Prpf38bQ80SY5 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Slc9a1-201ENSMUST00000030669 4676 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Nol4l-202ENSMUST00000109784 5610 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm8038-201ENSMUST00000164674 2044 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Rangap1-201ENSMUST00000052374 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Atp6v0a1-210ENSMUST00000168757 3967 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Dnmt3c-201ENSMUST00000119996 2223 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm25076-201ENSMUST00000104098 132 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm14807-201ENSMUST00000116640 983 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm22711-201ENSMUST00000116890 133 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Rpsa-ps5-201ENSMUST00000121462 885 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Utp23-202ENSMUST00000136129 779 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm12682-201ENSMUST00000144637 1081 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm12984-201ENSMUST00000145711 273 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Fxyd5-203ENSMUST00000159924 805 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Acat3-202ENSMUST00000160378 987 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Fxyd5-210ENSMUST00000162116 817 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Retn-202ENSMUST00000169234 1139 ntAPPRIS P1 TSL 2 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 2310034O05Rik-201ENSMUST00000185221 1107 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Cabcoco1-201ENSMUST00000020103 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm43852-201ENSMUST00000202098 917 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Fxyd4-202ENSMUST00000203066 522 ntTSL 3 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm45575-201ENSMUST00000210283 548 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 AC134537.1-201ENSMUST00000219205 265 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm18499-201ENSMUST00000220808 1021 ntBASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Csnk2b-201ENSMUST00000025246 961 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Akap10-202ENSMUST00000102650 3874 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Ap1b1-203ENSMUST00000109897 3942 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Aicda-201ENSMUST00000043301 2405 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Smarca1-205ENSMUST00000141084 1965 ntTSL 2 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Il22ra1-201ENSMUST00000102546 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Trappc11-201ENSMUST00000039061 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Acsf3-202ENSMUST00000212781 2604 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Acsm4-201ENSMUST00000047045 2152 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Prpf38bQ80SY5 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Dis3l-201ENSMUST00000068367 3605 ntTSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Gm10829-201ENSMUST00000202084 2988 ntBASIC12□□□□□ -0.49
Prpf38bQ80SY5 Cacna1c-203ENSMUST00000112790 7631 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Cd300lg-201ENSMUST00000017453 2353 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Ptbp1-202ENSMUST00000095457 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Pik3cd-206ENSMUST00000122059 4832 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
Prpf38bQ80SY5 Cdc42ep4-202ENSMUST00000106616 3405 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 70.1 ms