Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 Msh5-202ENSMUST00000097338 2678 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Snrnp40Q6PE01 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Slc25a22-203ENSMUST00000106007 2546 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 4932443L11Rik-202ENSMUST00000177130 2827 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Stxbp6-202ENSMUST00000120531 4209 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Erich5-201ENSMUST00000060894 2383 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Tcf4-251ENSMUST00000202474 1810 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Ces2e-201ENSMUST00000034355 2699 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Ankrd60-201ENSMUST00000109112 833 ntAPPRIS ALT2 TSL 3 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Polr2j-203ENSMUST00000111129 474 ntTSL 3 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm15625-201ENSMUST00000117617 1093 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm12337-201ENSMUST00000119634 400 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm12461-201ENSMUST00000120231 1239 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm3828-201ENSMUST00000121817 257 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm11205-201ENSMUST00000137738 431 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm11753-201ENSMUST00000151091 396 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Cdhr4-208ENSMUST00000176373 492 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Olfr1432-201ENSMUST00000180978 930 ntAPPRIS ALT2 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm27211-201ENSMUST00000183507 631 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Plac9a-203ENSMUST00000183725 439 ntTSL 3 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Plac9b-202ENSMUST00000183811 396 ntTSL 3 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 1700009J07Rik-202ENSMUST00000185309 920 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm28096-201ENSMUST00000191391 824 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 P4htm-204ENSMUST00000193621 1297 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm42511-201ENSMUST00000196160 234 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm8579-201ENSMUST00000201943 733 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm44698-201ENSMUST00000207382 384 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 AC162938.2-202ENSMUST00000215497 722 ntTSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm4930-201ENSMUST00000219926 1087 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Mrps11-201ENSMUST00000032840 1056 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Ctrl-201ENSMUST00000034368 879 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Olfr435-201ENSMUST00000058118 942 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Ifi27-201ENSMUST00000066701 889 ntAPPRIS P4 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Mir326-201ENSMUST00000083637 95 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 4732414G09Rik-201ENSMUST00000156243 2422 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm45743-201ENSMUST00000212701 2795 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm2238-201ENSMUST00000192074 3669 ntBASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Eid3-201ENSMUST00000211623 1305 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gps2-202ENSMUST00000072581 1311 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Nuak2-202ENSMUST00000082125 3107 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Ncapd2-201ENSMUST00000043848 4629 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Txndc5-203ENSMUST00000160653 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Gm13553-201ENSMUST00000133025 1970 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Aldoart2-201ENSMUST00000080123 1658 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Clec16a-203ENSMUST00000115823 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Snrnp40Q6PE01 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Cpa5-202ENSMUST00000115138 1778 ntTSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm43242-201ENSMUST00000199507 1776 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 5930412G12Rik-201ENSMUST00000091324 2403 ntTSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Pde4b-203ENSMUST00000097950 2756 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Abhd18-203ENSMUST00000159774 4455 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Rab8a-201ENSMUST00000003121 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm42480-201ENSMUST00000198434 2595 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Mroh7-201ENSMUST00000106770 4346 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Pram1-201ENSMUST00000052079 2278 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Bpi-201ENSMUST00000065039 1926 ntAPPRIS P2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Mov10l1-203ENSMUST00000146993 4133 ntAPPRIS ALT2 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Kif22-ps-201ENSMUST00000119302 1984 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Qrsl1-201ENSMUST00000020012 1981 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Eef1d-205ENSMUST00000109972 1624 ntAPPRIS ALT2 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Spem2-201ENSMUST00000056941 1640 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Tprkb-204ENSMUST00000113752 749 ntAPPRIS P1 TSL 5 BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Cd55b-202ENSMUST00000119432 986 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 B230307C23Rik-202ENSMUST00000122450 1298 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm19246-201ENSMUST00000173599 255 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm5342-201ENSMUST00000181982 1003 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Gm8384-201ENSMUST00000190905 704 ntBASIC9.98□□□□□ -0.81
Snrnp40Q6PE01 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms