Protein–RNA interactions for Protein: Q6PDG5

Smarcc2, SWI/SNF complex subunit SMARCC2, mousemouse

Predictions only

Length 1,213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc2Q6PDG5 Sept11-201ENSMUST00000074733 5028 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Ablim1-210ENSMUST00000111550 2731 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Pigu-205ENSMUST00000165234 1626 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Atp6v0e2-202ENSMUST00000203011 1612 ntTSL 2 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Wnt5a-201ENSMUST00000063465 7010 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 5031434O11Rik-201ENSMUST00000180404 3731 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Sec16a-202ENSMUST00000114082 8797 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Smarcc2Q6PDG5 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Ccdc189-201ENSMUST00000072155 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Slc1a4-201ENSMUST00000004634 3872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Slc36a1-203ENSMUST00000108872 5264 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Nox4-201ENSMUST00000032781 3753 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Dsc2-202ENSMUST00000075214 4508 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Ptprh-201ENSMUST00000049113 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm14314-201ENSMUST00000118225 1015 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm15725-201ENSMUST00000119947 1090 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 1700007P06Rik-201ENSMUST00000160380 823 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm3508-201ENSMUST00000186012 792 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm43186-201ENSMUST00000198130 824 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 1700013M08Rik-202ENSMUST00000200080 798 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 AC171241.1-201ENSMUST00000228144 1166 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Tnfsf13b-201ENSMUST00000033892 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Rsg1-201ENSMUST00000097813 985 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm10803-201ENSMUST00000099692 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Nras-201ENSMUST00000029445 4470 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Anxa4-202ENSMUST00000113675 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Pdha1-201ENSMUST00000033662 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Usp5-201ENSMUST00000047510 3213 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Ccnk-202ENSMUST00000221167 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Arfgap2-201ENSMUST00000028691 2791 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Celf3-213ENSMUST00000199775 2351 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Nudt13-207ENSMUST00000224311 1574 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Hbs1l-209ENSMUST00000219915 2733 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 CT009489.1-201ENSMUST00000227740 1893 ntBASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Pou2f3-201ENSMUST00000034513 2610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Myo7a-213ENSMUST00000205746 6689 ntTSL 5 BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Smarcc2Q6PDG5 Gm36957-201ENSMUST00000192982 2824 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Drc7-201ENSMUST00000058479 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 AC109214.1-201ENSMUST00000219520 1372 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Foxd2os-201ENSMUST00000123272 2908 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gtf2a1-202ENSMUST00000063314 2265 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Tsc22d4-204ENSMUST00000110983 1043 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm13328-201ENSMUST00000120816 1020 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm16001-201ENSMUST00000127989 875 ntTSL 3 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm17391-201ENSMUST00000171036 126 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm23045-201ENSMUST00000175041 96 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Dusp13-211ENSMUST00000183943 779 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm27241-202ENSMUST00000185013 570 ntTSL 2 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm7504-201ENSMUST00000201449 424 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm17825-201ENSMUST00000206836 794 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Pgpep1l-202ENSMUST00000207874 677 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Gm45338-206ENSMUST00000211460 1155 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Ntan1-201ENSMUST00000023362 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 1700013F07Rik-201ENSMUST00000029485 661 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Pin1-201ENSMUST00000034689 3843 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Ablim1-213ENSMUST00000111559 3184 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Cd163l1-201ENSMUST00000084460 3454 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Kng2-203ENSMUST00000115349 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 A930038B10Rik-202ENSMUST00000181044 3415 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Klhl3-202ENSMUST00000160860 7149 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Cars-202ENSMUST00000105909 2462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Cyp4x1-201ENSMUST00000051400 1524 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Foxp1-201ENSMUST00000074346 2118 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Rnf220-201ENSMUST00000030439 3029 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Stat3-202ENSMUST00000103114 6042 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 BC043934-202ENSMUST00000185694 2356 ntBASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Pls3-201ENSMUST00000033547 3242 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Tcn2-207ENSMUST00000109993 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Akap3-201ENSMUST00000095440 3153 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Smarcc2Q6PDG5 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 Astn1-211ENSMUST00000195311 3642 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 P2rx7-203ENSMUST00000100737 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 Dnajb6-203ENSMUST00000114839 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 Dcaf12l1-202ENSMUST00000115056 3495 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 Olfr464-204ENSMUST00000216461 2112 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 Gm9387-201ENSMUST00000098624 1320 ntBASIC13.21□□□□□ -0.29
Smarcc2Q6PDG5 Cyp11b1-201ENSMUST00000170259 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms