Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Ift46-201ENSMUST00000002099 4169 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Wdr31-202ENSMUST00000107452 1437 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm13910-201ENSMUST00000121752 1428 ntBASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 9230105E05Rik-201ENSMUST00000161291 2250 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Krt39Q6IFX4 Peg10-202ENSMUST00000176204 6667 ntAPPRIS P2 TSL 2 BASIC12.52□□□□□ -0.4
Krt39Q6IFX4 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt39Q6IFX4 Lrrc8a-201ENSMUST00000095078 4301 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Krt39Q6IFX4 Topors-201ENSMUST00000042575 3856 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Krt39Q6IFX4 AC174797.1-201ENSMUST00000224339 1649 ntBASIC12.52□□□□□ -0.4
Krt39Q6IFX4 Gm34785-201ENSMUST00000222571 4582 ntTSL 5 BASIC12.52□□□□□ -0.4
Krt39Q6IFX4 Nphs1-201ENSMUST00000006825 4608 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Tyk2-203ENSMUST00000214454 4770 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm23949-201ENSMUST00000104027 127 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm11663-201ENSMUST00000117888 290 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm28071-201ENSMUST00000190355 478 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gstp-ps-201ENSMUST00000195526 631 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm18038-201ENSMUST00000197900 485 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm9353-201ENSMUST00000200472 604 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 AC122891.1-201ENSMUST00000218671 268 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Gm6722-201ENSMUST00000221586 390 ntBASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Rpl30-201ENSMUST00000009039 570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Sec24d-201ENSMUST00000047923 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Lcorl-205ENSMUST00000121573 2378 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Syt14-201ENSMUST00000016344 1904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Clpb-211ENSMUST00000209579 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Dglucy-204ENSMUST00000110073 3184 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Kcnk10-201ENSMUST00000110113 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Slc10a6-201ENSMUST00000031263 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Krt39Q6IFX4 Sh2d5-201ENSMUST00000105823 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Ribc2-201ENSMUST00000023067 1652 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Bbs2-201ENSMUST00000034206 3064 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Elfn1-201ENSMUST00000050519 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Lamc2-203ENSMUST00000185356 4916 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Rnasel-204ENSMUST00000182538 2761 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm26047-201ENSMUST00000157308 113 ntBASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm10807-201ENSMUST00000177134 795 ntBASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Higd1c-202ENSMUST00000177211 555 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm26047-202ENSMUST00000198840 115 ntBASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm18539-201ENSMUST00000204745 1090 ntBASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm45575-201ENSMUST00000210283 548 ntBASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm5363-201ENSMUST00000211927 938 ntBASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Crygs-201ENSMUST00000040592 708 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm5420-201ENSMUST00000071008 2206 ntTSL 2 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Adra2b-202ENSMUST00000104934 4014 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Pde1b-205ENSMUST00000227955 3258 ntAPPRIS ALT1 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Gm29771-201ENSMUST00000193142 1423 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Plg-201ENSMUST00000014578 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Megf11-203ENSMUST00000118485 3944 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Krt39Q6IFX4 Abhd18-201ENSMUST00000108077 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 H2-T3-201ENSMUST00000025312 2114 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Tasp1-202ENSMUST00000099304 2127 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Krt39Q6IFX4 Nectin4-201ENSMUST00000006578 3636 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 62.9 ms