Protein–RNA interactions for Protein: Q61371

Ift88, Intraflagellar transport protein 88 homolog, mousemouse

Predictions only

Length 824 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift88Q61371 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Cep250-202ENSMUST00000094421 7919 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 AC207128.2-201ENSMUST00000223708 1924 ntBASIC12.52□□□□□ -0.41
Ift88Q61371 Fip1l1-204ENSMUST00000113536 4769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Bco1-203ENSMUST00000176860 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Gm26868-201ENSMUST00000181927 2655 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Stk17b-201ENSMUST00000027263 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Rab11fip2-202ENSMUST00000170819 1539 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 Lhx9-205ENSMUST00000112030 4633 ntTSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Ift88Q61371 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Ift88Q61371 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Ift88Q61371 Azin1-203ENSMUST00000110329 4217 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm38271-201ENSMUST00000192296 1603 ntBASIC12.51□□□□□ -0.41
Ift88Q61371 Tnip1-203ENSMUST00000102731 2973 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Gnl2-201ENSMUST00000030684 2366 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Arhgef4-204ENSMUST00000159747 6514 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Zmynd11-203ENSMUST00000110634 3824 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm10436-202ENSMUST00000220521 1788 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Tmem135-202ENSMUST00000117852 2986 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm8876-201ENSMUST00000120768 1122 ntBASIC12.51□□□□□ -0.41
Ift88Q61371 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm11683-201ENSMUST00000147006 918 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm7783-201ENSMUST00000204795 781 ntBASIC12.51□□□□□ -0.41
Ift88Q61371 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Ablim2-203ENSMUST00000114203 1333 ntTSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Gm16364-201ENSMUST00000153722 1313 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Lpin3-204ENSMUST00000109457 3215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 1500012K07Rik-201ENSMUST00000181846 2345 ntTSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Edil3-202ENSMUST00000081769 5317 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Nxpe5-203ENSMUST00000159964 3585 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Ak8-201ENSMUST00000074156 1567 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Camk2a-203ENSMUST00000102888 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Sept9-205ENSMUST00000106354 3869 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Tmem8b-209ENSMUST00000167153 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 AC155245.1-201ENSMUST00000222266 1804 ntBASIC12.51□□□□□ -0.41
Ift88Q61371 Hsh2d-201ENSMUST00000072097 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Ift88Q61371 Esco1-201ENSMUST00000025142 4433 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Acsf2-201ENSMUST00000103164 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Ift88Q61371 Slc38a4-202ENSMUST00000166223 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Rin1-208ENSMUST00000225427 4503 ntAPPRIS P2 BASIC12.5□□□□□ -0.41
Ift88Q61371 Trim46-203ENSMUST00000107464 3252 ntTSL 5 BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm10646-201ENSMUST00000213227 3293 ntTSL 2 BASIC12.5□□□□□ -0.41
Ift88Q61371 Ccdc96-201ENSMUST00000060100 3585 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Ift88Q61371 Mx2-202ENSMUST00000188251 2421 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Asb6-201ENSMUST00000041726 4147 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Med13l-201ENSMUST00000100816 9296 ntAPPRIS P3 TSL 2 BASIC12.5□□□□□ -0.41
Ift88Q61371 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC12.5□□□□□ -0.41
Ift88Q61371 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm14724-201ENSMUST00000118400 537 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 5730437C11Rik-201ENSMUST00000155540 242 ntTSL 5 BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm25668-201ENSMUST00000157700 129 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm17376-201ENSMUST00000166016 84 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Ift88Q61371 Adtrp-204ENSMUST00000179758 1046 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Ift88Q61371 1700120C18Rik-201ENSMUST00000182952 985 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm29539-201ENSMUST00000188031 758 ntTSL 3 BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm4857-201ENSMUST00000192718 785 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Gm43349-201ENSMUST00000200047 503 ntTSL 2 BASIC12.5□□□□□ -0.41
Ift88Q61371 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Gm45856-201ENSMUST00000212752 416 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Syn2-202ENSMUST00000169345 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Nudt13-207ENSMUST00000224311 1574 ntBASIC12.5□□□□□ -0.41
Ift88Q61371 Slc13a5-202ENSMUST00000137701 1746 ntTSL 5 BASIC12.5□□□□□ -0.41
Ift88Q61371 Neu2-207ENSMUST00000172222 1715 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Clp1-201ENSMUST00000028475 1912 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Snai2-201ENSMUST00000023356 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Zcwpw1-201ENSMUST00000035852 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Nxpe5-201ENSMUST00000110929 2312 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
Ift88Q61371 Tifa-205ENSMUST00000171621 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Ift88Q61371 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Oxct1-201ENSMUST00000110690 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Ift88Q61371 Ccnt2-201ENSMUST00000027587 6738 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Parp11-202ENSMUST00000112191 3414 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Lrrc61-201ENSMUST00000101436 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Ift88Q61371 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.6 ms