Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 AC151902.1-201ENSMUST00000227800 375 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Tmem253-204ENSMUST00000228408 415 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Mmachc-201ENSMUST00000030453 2106 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Rln1-201ENSMUST00000044143 745 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Mrpl50-201ENSMUST00000057829 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Flicr-201ENSMUST00000144719 3455 ntTSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Btrc-209ENSMUST00000224478 2194 ntBASIC9.72□□□□□ -0.85
Znf48Q3US17 Slc36a4-201ENSMUST00000061568 6539 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Olfr202-203ENSMUST00000217485 1321 ntAPPRIS P1 TSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Klhdc7b-202ENSMUST00000225666 3951 ntAPPRIS ALT2 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Msantd1-201ENSMUST00000050535 2793 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Slc12a7-201ENSMUST00000017900 5142 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Myo15-203ENSMUST00000094135 11715 ntAPPRIS ALT2 TSL 5 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Trak1-201ENSMUST00000045903 4827 ntAPPRIS P2 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Zp1-201ENSMUST00000025641 1963 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Alox12-201ENSMUST00000000329 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.72□□□□□ -0.85
Znf48Q3US17 Tktl2-201ENSMUST00000002025 2021 ntAPPRIS P1 BASIC9.72□□□□□ -0.85
Znf48Q3US17 Gm7224-201ENSMUST00000121359 2066 ntBASIC9.71□□□□□ -0.85
Znf48Q3US17 Pcdhga6-201ENSMUST00000195823 4733 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.85
Znf48Q3US17 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Trp63-204ENSMUST00000115305 1729 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Lef1-201ENSMUST00000029611 3482 ntAPPRIS P2 TSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.85
Znf48Q3US17 Gm23949-201ENSMUST00000104027 127 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm13045-201ENSMUST00000119019 712 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm8261-201ENSMUST00000119275 1208 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Nudt6-207ENSMUST00000141438 899 ntTSL 2 BASIC9.71□□□□□ -0.86
Znf48Q3US17 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC9.71□□□□□ -0.86
Znf48Q3US17 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm6407-201ENSMUST00000176468 549 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm3460-202ENSMUST00000178927 618 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm21103-203ENSMUST00000179042 618 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm3029-202ENSMUST00000179327 618 ntAPPRIS ALT2 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm6652-201ENSMUST00000186414 1070 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm28071-201ENSMUST00000190355 478 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm45259-201ENSMUST00000209217 1006 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Mob2-203ENSMUST00000209732 977 ntAPPRIS ALT2 TSL 3 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm5369-201ENSMUST00000217499 588 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC9.71□□□□□ -0.86
Znf48Q3US17 AC134869.3-201ENSMUST00000225581 343 ntAPPRIS P1 BASIC9.71□□□□□ -0.86
Znf48Q3US17 AC133517.2-201ENSMUST00000226820 690 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 AC115357.1-201ENSMUST00000227575 466 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Stap1-201ENSMUST00000031171 909 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Phpt1-201ENSMUST00000039156 937 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Il22-201ENSMUST00000096691 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Stat1-211ENSMUST00000189347 2588 ntAPPRIS ALT1 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Adgrl3-214ENSMUST00000120445 5230 ntTSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Fank1-201ENSMUST00000065359 2004 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Tnk2os-201ENSMUST00000141256 1392 ntTSL 2 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Cog3-203ENSMUST00000227473 4197 ntBASIC9.71□□□□□ -0.86
Znf48Q3US17 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Tia1-211ENSMUST00000130967 1445 ntTSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Elavl2-204ENSMUST00000107110 3671 ntAPPRIS ALT1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Dnd1-201ENSMUST00000061522 1451 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Dll4-201ENSMUST00000102517 3747 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Spesp1-201ENSMUST00000056949 3042 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Astl-201ENSMUST00000059839 2377 ntAPPRIS P3 TSL 1 (best) BASIC9.71□□□□□ -0.86
Znf48Q3US17 Lamb1-205ENSMUST00000169088 5557 ntAPPRIS P1 TSL 5 BASIC9.71□□□□□ -0.86
Znf48Q3US17 Gm3830-201ENSMUST00000185540 1715 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Stat5b-202ENSMUST00000107358 5213 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Cflar-202ENSMUST00000097722 1771 ntAPPRIS ALT2 TSL 5 BASIC9.7□□□□□ -0.86
Znf48Q3US17 Pla2g4b-201ENSMUST00000126150 2790 ntAPPRIS P1 TSL 5 BASIC9.7□□□□□ -0.86
Znf48Q3US17 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Pnkd-202ENSMUST00000087225 2859 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Hmbox1-202ENSMUST00000067843 2931 ntAPPRIS P3 TSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Hnrnpf-201ENSMUST00000035493 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 4921522P10Rik-201ENSMUST00000048606 2101 ntTSL 1 (best) BASIC9.7□□□□□ -0.86
Znf48Q3US17 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC9.7□□□□□ -0.86
Znf48Q3US17 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC9.7□□□□□ -0.86
Znf48Q3US17 Gm14058-201ENSMUST00000116082 735 ntBASIC9.7□□□□□ -0.86
Znf48Q3US17 Gm15103-201ENSMUST00000119893 871 ntBASIC9.7□□□□□ -0.86
Znf48Q3US17 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC9.7□□□□□ -0.86
Retrieved 100 of 76,532 protein–RNA pairs in 73.9 ms