Protein–RNA interactions for Protein: Q07802

Ebf1, Transcription factor COE1, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf1Q07802 Gm18561-201ENSMUST00000206027 804 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm19046-201ENSMUST00000221263 1298 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 CT009527.1-201ENSMUST00000224205 339 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm7536-201ENSMUST00000077389 444 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm5453-201ENSMUST00000080866 447 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gtf2ird2-201ENSMUST00000016086 3482 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Epb41l1-206ENSMUST00000109577 6251 ntTSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Cfap161-201ENSMUST00000011298 1335 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gm45677-201ENSMUST00000209975 1341 ntBASIC11.54□□□□□ -0.56
Ebf1Q07802 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Dnmt1-203ENSMUST00000178110 5870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Pip5k1b-202ENSMUST00000112673 2387 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Ebf1Q07802 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Gfra1-209ENSMUST00000169850 3224 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Armc3-202ENSMUST00000114640 2818 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Cngb1-202ENSMUST00000119870 6189 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Fam163a-201ENSMUST00000015628 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Zfp251-201ENSMUST00000080406 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Meltf-201ENSMUST00000023464 4133 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Ebf1Q07802 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Spns3-202ENSMUST00000092940 2080 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Ttc29-202ENSMUST00000109902 1416 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Immt-203ENSMUST00000114151 2518 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Herpud1-201ENSMUST00000034220 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Hnrnpc-206ENSMUST00000227458 1683 ntAPPRIS ALT1 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Lsp1-211ENSMUST00000149521 1910 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 4933406C10Rik-201ENSMUST00000180391 1451 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Tmem269-201ENSMUST00000030394 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Aars2-201ENSMUST00000024733 3348 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Tomm5-201ENSMUST00000107807 442 ntTSL 2 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm12036-201ENSMUST00000120008 530 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm25545-201ENSMUST00000122673 323 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Ndufc2-202ENSMUST00000149122 470 ntTSL 2 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm6114-201ENSMUST00000182472 968 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Clec7a-202ENSMUST00000184581 707 ntAPPRIS P2 TSL 3 BASIC11.53□□□□□ -0.56
Ebf1Q07802 Mir8093-201ENSMUST00000185043 137 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 5730585A16Rik-201ENSMUST00000193457 1027 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm9884-201ENSMUST00000194343 1222 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Ighv1-60-201ENSMUST00000195816 405 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm43778-201ENSMUST00000199438 199 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm4811-201ENSMUST00000220879 1220 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 CT573047.1-201ENSMUST00000223652 851 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 AC134869.4-202ENSMUST00000224350 837 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Nmi-201ENSMUST00000028314 1291 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Apoc4-201ENSMUST00000003071 538 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Cacna1c-201ENSMUST00000075591 7584 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Mb21d1-202ENSMUST00000070742 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Gm17213-201ENSMUST00000165161 1360 ntBASIC11.53□□□□□ -0.56
Ebf1Q07802 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Ebf1Q07802 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.52□□□□□ -0.56
Ebf1Q07802 Gbf1-201ENSMUST00000026254 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ebf1Q07802 Hs6st2-202ENSMUST00000114871 4351 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ebf1Q07802 Aoc2-201ENSMUST00000041095 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ebf1Q07802 AU019823-201ENSMUST00000131351 3316 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Ebf1Q07802 AU019823-205ENSMUST00000171462 3339 ntAPPRIS P1 TSL 3 BASIC11.52□□□□□ -0.56
Ebf1Q07802 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Ebf1Q07802 Gm8110-202ENSMUST00000211297 1782 ntTSL 5 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm37931-201ENSMUST00000194686 2866 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm25053-201ENSMUST00000103982 133 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm25922-201ENSMUST00000104281 130 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm24791-201ENSMUST00000104284 131 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm14395-201ENSMUST00000120494 563 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 2810403D21Rik-208ENSMUST00000153212 1005 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm24248-201ENSMUST00000157321 322 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm24679-201ENSMUST00000158762 111 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm25053-202ENSMUST00000199731 132 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC11.52□□□□□ -0.57
Ebf1Q07802 0610033M10Rik-201ENSMUST00000204546 506 ntTSL 5 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm44552-201ENSMUST00000205458 1247 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 CT030170.2-201ENSMUST00000223267 126 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Pcgf5-204ENSMUST00000224772 1266 ntAPPRIS ALT1 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Hils1-201ENSMUST00000038928 864 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Ebf1Q07802 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm4978-201ENSMUST00000071565 801 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Lhfpl5-201ENSMUST00000080780 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Ebf1Q07802 Gm10263-201ENSMUST00000085163 300 ntBASIC11.52□□□□□ -0.57
Ebf1Q07802 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms