Protein–RNA interactions for Protein: Q00422

Gabpa, GA-binding protein alpha chain, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GabpaQ00422 Gm25580-201ENSMUST00000083409 327 ntBASIC12.85□□□□□ -0.35
GabpaQ00422 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.85□□□□□ -0.35
GabpaQ00422 Samd4b-201ENSMUST00000040531 4349 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
GabpaQ00422 Sowahc-201ENSMUST00000182161 4482 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
GabpaQ00422 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Atp6v1e1-201ENSMUST00000019354 1312 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
GabpaQ00422 Stx5a-213ENSMUST00000176381 2251 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Gm37651-201ENSMUST00000194679 1494 ntBASIC12.85□□□□□ -0.35
GabpaQ00422 Mterf3-201ENSMUST00000021991 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
GabpaQ00422 Ces3a-201ENSMUST00000093222 2046 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Gm26883-201ENSMUST00000180945 4878 ntTSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Gstcd-201ENSMUST00000029651 3503 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
GabpaQ00422 Nop16-201ENSMUST00000026987 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Ikzf2-204ENSMUST00000188110 1365 ntTSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Ikzf2-208ENSMUST00000190855 1359 ntTSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Emp1-202ENSMUST00000111907 2763 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Socs6-202ENSMUST00000123826 2921 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Pemt-202ENSMUST00000102692 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Rpl23-201ENSMUST00000103146 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Gm15935-201ENSMUST00000141004 607 ntTSL 3 BASIC12.84□□□□□ -0.35
GabpaQ00422 Gm21964-201ENSMUST00000178785 936 ntTSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Mpv17-206ENSMUST00000201353 846 ntAPPRIS P3 TSL 3 BASIC12.84□□□□□ -0.35
GabpaQ00422 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Gm44755-201ENSMUST00000207830 2102 ntBASIC12.84□□□□□ -0.35
GabpaQ00422 Tex29-205ENSMUST00000209692 884 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Ly86-201ENSMUST00000021860 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Adipoq-201ENSMUST00000023593 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Myf6-201ENSMUST00000044210 1263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Catsperz-201ENSMUST00000057716 781 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
GabpaQ00422 Fam78a-201ENSMUST00000056406 4107 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Acnat2-202ENSMUST00000107698 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Paqr5-201ENSMUST00000034817 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Runx1-202ENSMUST00000113956 4738 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Ung-203ENSMUST00000112275 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Ap1s2-203ENSMUST00000112294 3199 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Ubap1-201ENSMUST00000072866 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 E030013I19Rik-201ENSMUST00000148089 2754 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Tmcc3os-201ENSMUST00000146744 2912 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Apbb2-215ENSMUST00000162349 3362 ntAPPRIS P3 TSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Apbb2-201ENSMUST00000087256 3362 ntAPPRIS ALT1 TSL 5 BASIC12.84□□□□□ -0.35
GabpaQ00422 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
GabpaQ00422 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
GabpaQ00422 Otub2-202ENSMUST00000101094 3228 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Ctps2-205ENSMUST00000112302 3223 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Gmeb1-201ENSMUST00000030733 2485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Rtn4ip1-201ENSMUST00000054418 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Xpc-201ENSMUST00000032182 3634 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 Traf7-201ENSMUST00000070777 2384 ntTSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Srpk1-202ENSMUST00000114767 445 ntTSL 3 BASIC12.83□□□□□ -0.36
GabpaQ00422 Gm16876-201ENSMUST00000151945 760 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Gm19013-201ENSMUST00000183895 1222 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 Gm19014-201ENSMUST00000184828 1189 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 1700063K16Rik-201ENSMUST00000190306 369 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 Ube2d3-216ENSMUST00000199613 738 ntAPPRIS P2 TSL 3 BASIC12.83□□□□□ -0.36
GabpaQ00422 Gm43634-201ENSMUST00000202671 675 ntTSL 3 BASIC12.83□□□□□ -0.36
GabpaQ00422 Gm44814-201ENSMUST00000207018 434 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 Mrpl23-206ENSMUST00000210662 736 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 Gm6390-201ENSMUST00000215034 589 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 Gm8255-201ENSMUST00000218693 305 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 AC123694.1-201ENSMUST00000219525 644 ntTSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 AC130477.1-201ENSMUST00000226982 420 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 Nme6-201ENSMUST00000035053 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Cmklr1-201ENSMUST00000047936 2882 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 Gng5-202ENSMUST00000118280 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Gm43075-201ENSMUST00000198613 3905 ntBASIC12.83□□□□□ -0.36
GabpaQ00422 Gm6268-201ENSMUST00000115253 1453 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
GabpaQ00422 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 D030045P18Rik-204ENSMUST00000215085 2186 ntTSL 5 BASIC12.83□□□□□ -0.36
GabpaQ00422 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
GabpaQ00422 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 88.2 ms