Protein–RNA interactions for Protein: P97386

Lig3, DNA ligase 3, mousemouse

Predictions only

Length 1,015 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3P97386 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 4930463O16Rik-201ENSMUST00000020222 2088 ntTSL 2 BASIC12.47□□□□□ -0.41
Lig3P97386 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Cyp2j13-203ENSMUST00000107078 1493 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Cd276-201ENSMUST00000039788 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Esrp1-201ENSMUST00000043781 3743 ntTSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 Camk2g-201ENSMUST00000071816 3703 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Bicra-204ENSMUST00000210781 5975 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 Csf1-201ENSMUST00000014743 4176 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Slc25a21-205ENSMUST00000217690 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Abcb8-201ENSMUST00000073076 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Nxf2-202ENSMUST00000113187 2316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Ppargc1b-201ENSMUST00000063307 3330 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Ighv7-2-201ENSMUST00000103462 354 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Lig3P97386 Akr1b10-202ENSMUST00000115051 1022 ntTSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 Gm15566-201ENSMUST00000121130 590 ntBASIC12.47□□□□□ -0.41
Lig3P97386 Gm13205-201ENSMUST00000123548 562 ntTSL 3 BASIC12.47□□□□□ -0.41
Lig3P97386 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC12.47□□□□□ -0.41
Lig3P97386 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Gm4034-201ENSMUST00000187674 480 ntBASIC12.47□□□□□ -0.41
Lig3P97386 Odf3-201ENSMUST00000026555 1128 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 4930569F06Rik-201ENSMUST00000036821 433 ntBASIC12.47□□□□□ -0.41
Lig3P97386 H1foo-201ENSMUST00000037831 1113 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Olfr117-201ENSMUST00000073636 954 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Lig3P97386 Tbc1d24-209ENSMUST00000201301 4261 ntTSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 Hr-205ENSMUST00000163060 5278 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 Frmd4a-202ENSMUST00000091497 6208 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 1700017B05Rik-202ENSMUST00000213199 3722 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
Lig3P97386 Gm28047-201ENSMUST00000184772 1611 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
Lig3P97386 Myf5-201ENSMUST00000000445 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Mybl1-202ENSMUST00000115468 2493 ntTSL 5 BASIC12.47□□□□□ -0.41
Lig3P97386 G630016G05Rik-202ENSMUST00000156095 3398 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Gm45278-201ENSMUST00000209650 2414 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Grem1-201ENSMUST00000099575 4148 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Sord-201ENSMUST00000110551 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Lig3P97386 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lig3P97386 Ppp1r3b-204ENSMUST00000211648 4386 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
Lig3P97386 Olfr279-203ENSMUST00000216822 5605 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Cib2-201ENSMUST00000041901 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 A1cf-202ENSMUST00000224304 2968 ntAPPRIS ALT1 BASIC12.46□□□□□ -0.41
Lig3P97386 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Prkaca-202ENSMUST00000211558 1399 ntTSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Orc5-201ENSMUST00000030872 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Gm11494-201ENSMUST00000142279 1738 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Map3k12-208ENSMUST00000171565 4318 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Zswim9-203ENSMUST00000119558 3111 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.46□□□□□ -0.41
Lig3P97386 Gm7541-201ENSMUST00000118361 535 ntBASIC12.46□□□□□ -0.41
Lig3P97386 Eef1akmt2-202ENSMUST00000120425 573 ntTSL 3 BASIC12.46□□□□□ -0.41
Lig3P97386 2810408I11Rik-201ENSMUST00000122813 435 ntTSL 2 BASIC12.46□□□□□ -0.41
Lig3P97386 Prss36-208ENSMUST00000156152 1132 ntTSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 4930405O22Rik-201ENSMUST00000164605 954 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 9330179D12Rik-201ENSMUST00000180569 1105 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC12.46□□□□□ -0.41
Lig3P97386 Gm44421-201ENSMUST00000205064 1221 ntBASIC12.46□□□□□ -0.41
Lig3P97386 CT485606.1-201ENSMUST00000213187 878 ntBASIC12.46□□□□□ -0.41
Lig3P97386 Colca2-202ENSMUST00000215038 1269 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Gm40578-201ENSMUST00000220837 390 ntTSL 2 BASIC12.46□□□□□ -0.41
Lig3P97386 1700011B04Rik-212ENSMUST00000223526 889 ntTSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Eny2-204ENSMUST00000226827 558 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Lig3P97386 U2af1l4-201ENSMUST00000043273 884 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Nat8f6-201ENSMUST00000087656 925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Snrpg-201ENSMUST00000089558 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Lig3P97386 Tut1-201ENSMUST00000096239 2747 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
Lig3P97386 Rbm5-201ENSMUST00000035199 3064 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Cdc20b-201ENSMUST00000109244 1620 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Tbc1d14-204ENSMUST00000130417 2665 ntTSL 5 BASIC12.46□□□□□ -0.41
Lig3P97386 Frmd4a-216ENSMUST00000176828 4355 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Cpsf7-201ENSMUST00000038379 3604 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Cacna1s-202ENSMUST00000112068 6018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Kcnh3-201ENSMUST00000041415 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 AC154314.2-201ENSMUST00000223677 3502 ntBASIC12.46□□□□□ -0.42
Lig3P97386 Tm9sf1-202ENSMUST00000120041 2164 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Lig3P97386 Mrps17-206ENSMUST00000121339 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Lig3P97386 Map4-206ENSMUST00000169851 3446 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Prok1-202ENSMUST00000197758 3063 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Gm21103-202ENSMUST00000170923 1761 ntAPPRIS P5 TSL 5 BASIC12.46□□□□□ -0.42
Lig3P97386 Abcb9-201ENSMUST00000031354 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Gm10767-202ENSMUST00000168767 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Lig3P97386 Pbx1-208ENSMUST00000188912 3970 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Rhoj-203ENSMUST00000118966 4892 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Atg9b-201ENSMUST00000059401 3902 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Sema3g-201ENSMUST00000090180 4540 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 A130077B15Rik-201ENSMUST00000219429 2547 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Ash2l-210ENSMUST00000166078 2234 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Lig3P97386 Gm37859-201ENSMUST00000195529 2173 ntBASIC12.45□□□□□ -0.42
Lig3P97386 Zfp30-202ENSMUST00000122387 3342 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Lig3P97386 Nanos2-201ENSMUST00000063563 1563 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
Lig3P97386 Brd1-202ENSMUST00000109380 3259 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms