Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Gm26811-201ENSMUST00000181258 5485 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Six5P70178 Gm20498-203ENSMUST00000166664 2284 ntAPPRIS P1 TSL 2 BASIC10.63□□□□□ -0.71
Six5P70178 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Six5P70178 Gm21136-201ENSMUST00000186812 2575 ntBASIC10.63□□□□□ -0.71
Six5P70178 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.63□□□□□ -0.71
Six5P70178 Rbm39-201ENSMUST00000029149 2711 ntAPPRIS ALT1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Six5P70178 Gm43931-201ENSMUST00000204817 2870 ntBASIC10.63□□□□□ -0.71
Six5P70178 Qsox1-201ENSMUST00000035325 3348 ntAPPRIS P3 TSL 1 (best) BASIC10.63□□□□□ -0.71
Six5P70178 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.63□□□□□ -0.71
Six5P70178 Rcor3-202ENSMUST00000110849 3791 ntTSL 1 (best) BASIC10.63□□□□□ -0.71
Six5P70178 Fer1l4-201ENSMUST00000109611 6106 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Enpp5-201ENSMUST00000024756 2534 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Vmn1r24-201ENSMUST00000228097 1901 ntAPPRIS P1 BASIC10.62□□□□□ -0.71
Six5P70178 Scn5a-203ENSMUST00000120420 7536 ntAPPRIS ALT1 TSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Gm9333-201ENSMUST00000205452 1323 ntBASIC10.62□□□□□ -0.71
Six5P70178 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Atad5-202ENSMUST00000108239 7266 ntAPPRIS ALT2 TSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Rgs8-201ENSMUST00000041776 8474 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Nudt13-207ENSMUST00000224311 1574 ntBASIC10.62□□□□□ -0.71
Six5P70178 Ighg2b-202ENSMUST00000192188 2566 ntAPPRIS P5 BASIC10.62□□□□□ -0.71
Six5P70178 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Vamp1-202ENSMUST00000063588 1400 ntTSL 2 BASIC10.62□□□□□ -0.71
Six5P70178 Mapkapk5-203ENSMUST00000111782 969 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Gm12419-201ENSMUST00000116649 636 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm14740-201ENSMUST00000118538 1150 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm15617-201ENSMUST00000118973 771 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm13408-201ENSMUST00000119822 798 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm15432-201ENSMUST00000121106 195 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm15329-201ENSMUST00000121408 155 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm13935-201ENSMUST00000121859 798 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Rn7s1-201ENSMUST00000174924 300 ntBASIC10.62□□□□□ -0.71
Six5P70178 Rn7s2-201ENSMUST00000175032 300 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm26461-201ENSMUST00000175064 290 ntBASIC10.62□□□□□ -0.71
Six5P70178 Gm28694-201ENSMUST00000190681 722 ntTSL 3 BASIC10.62□□□□□ -0.71
Six5P70178 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 2010001M07Rik-201ENSMUST00000214235 364 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Gm18856-203ENSMUST00000222015 483 ntTSL 2 BASIC10.62□□□□□ -0.71
Six5P70178 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Egr2-201ENSMUST00000048289 2965 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Il1f10-201ENSMUST00000058056 538 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Arih2-201ENSMUST00000013338 3924 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Gm44573-201ENSMUST00000191753 2370 ntBASIC10.62□□□□□ -0.71
Six5P70178 Trim6-206ENSMUST00000214578 1506 ntTSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Magi1-203ENSMUST00000093769 4598 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Klhl14-202ENSMUST00000122333 4423 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Nnt-203ENSMUST00000109204 3198 ntTSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Frg2f1-201ENSMUST00000079611 1909 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Gsdma-201ENSMUST00000017348 2726 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Rasgrp4-208ENSMUST00000161522 3242 ntTSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Sema4c-208ENSMUST00000195620 3640 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
Six5P70178 Ptpn4-201ENSMUST00000064091 10874 ntAPPRIS P1 TSL 5 BASIC10.62□□□□□ -0.71
Six5P70178 Adgrv1-214ENSMUST00000224088 1492 ntBASIC10.61□□□□□ -0.71
Six5P70178 Topbp1-201ENSMUST00000035164 5224 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Lbh-201ENSMUST00000024857 3064 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Lypd6-202ENSMUST00000112712 3495 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Dnali1-201ENSMUST00000036383 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Vstm2a-202ENSMUST00000109647 1745 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 Rims1-203ENSMUST00000097809 6179 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Srrm4-201ENSMUST00000076124 7472 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Brd4-202ENSMUST00000114475 2731 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Ppara-201ENSMUST00000057979 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Lgsn-201ENSMUST00000062560 1937 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Dck-201ENSMUST00000031311 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Zfp629-201ENSMUST00000058038 6120 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Cstad-201ENSMUST00000102853 819 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC10.61□□□□□ -0.71
Six5P70178 AA387200-201ENSMUST00000147463 1177 ntTSL 3 BASIC10.61□□□□□ -0.71
Six5P70178 Fhit-204ENSMUST00000161302 860 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 H2al1i-201ENSMUST00000164729 318 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 Gm20535-201ENSMUST00000173157 1268 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 H2al1h-201ENSMUST00000177926 318 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 H2al1d-201ENSMUST00000178595 318 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 H2al1c-201ENSMUST00000178806 318 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 H2al1f-201ENSMUST00000179004 318 ntAPPRIS P1 BASIC10.61□□□□□ -0.71
Six5P70178 Gm29187-201ENSMUST00000186681 689 ntTSL 3 BASIC10.61□□□□□ -0.71
Six5P70178 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC10.61□□□□□ -0.71
Six5P70178 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 5830411K02Rik-201ENSMUST00000200000 997 ntBASIC10.61□□□□□ -0.71
Six5P70178 Klk1b19-ps-201ENSMUST00000205322 696 ntBASIC10.61□□□□□ -0.71
Six5P70178 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Pdzd9-203ENSMUST00000208635 1238 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 AC159819.2-201ENSMUST00000216151 342 ntBASIC10.61□□□□□ -0.71
Six5P70178 Colec11-203ENSMUST00000220836 887 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
Six5P70178 Gm9826-201ENSMUST00000029124 1299 ntBASIC10.61□□□□□ -0.71
Six5P70178 Gm6781-201ENSMUST00000038304 1242 ntBASIC10.61□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms