Protein–RNA interactions for Protein: P61969

Lmo4, LIM domain transcription factor LMO4, mousemouse

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lmo4P61969 Wdr17-211ENSMUST00000175915 4619 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Acsl6-208ENSMUST00000108899 1662 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Olfr223-202ENSMUST00000215626 1695 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Btbd9-201ENSMUST00000079924 6657 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Lmo4P61969 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Art2b-202ENSMUST00000209526 2819 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Lmo4P61969 Lipo2-201ENSMUST00000147153 3562 ntAPPRIS P1 TSL 5 BASIC9.15□□□□□ -0.95
Lmo4P61969 Fancc-214ENSMUST00000161977 3111 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Lmo4P61969 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC9.15□□□□□ -0.95
Lmo4P61969 D430013B06Rik-201ENSMUST00000192922 1872 ntBASIC9.15□□□□□ -0.95
Lmo4P61969 Adamts1-201ENSMUST00000023610 4884 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Lmo4P61969 Tmem237-202ENSMUST00000094917 1869 ntAPPRIS P4 TSL 1 (best) BASIC9.15□□□□□ -0.95
Lmo4P61969 Serinc4-202ENSMUST00000110613 2240 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Lmo4P61969 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Lmo4P61969 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Olfr601-203ENSMUST00000214110 2196 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Olfr601-204ENSMUST00000217416 2195 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm10614-201ENSMUST00000181414 2538 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm11986-201ENSMUST00000149481 1439 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm37660-201ENSMUST00000192754 1732 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Dpep2-201ENSMUST00000034373 1702 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Ceacam9-201ENSMUST00000001984 1396 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm43075-201ENSMUST00000198613 3905 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Gm42829-201ENSMUST00000198417 2585 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Cast-211ENSMUST00000223206 5141 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lmo4P61969 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm15003-201ENSMUST00000118884 446 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Gm12986-201ENSMUST00000119037 967 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 4930507D10Rik-201ENSMUST00000137411 1152 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm16165-201ENSMUST00000160140 795 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Gm17115-201ENSMUST00000164075 885 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Pax4-202ENSMUST00000164519 1229 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm8451-201ENSMUST00000170338 447 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Gm4862-201ENSMUST00000170405 438 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Pax4-203ENSMUST00000171089 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm7719-201ENSMUST00000182374 975 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 1700017M07Rik-201ENSMUST00000198307 940 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 BC028471-201ENSMUST00000200937 520 ntTSL 2 BASIC9.14□□□□□ -0.95
Lmo4P61969 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Hddc2-201ENSMUST00000000304 858 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Olfr314-201ENSMUST00000076393 1131 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm7536-201ENSMUST00000077389 444 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Gm5453-201ENSMUST00000080866 447 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Iqcf1-201ENSMUST00000085114 613 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Ank3-205ENSMUST00000092433 5072 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Zfp869-201ENSMUST00000080987 1590 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Zc3hc1-202ENSMUST00000102992 1865 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gp2-202ENSMUST00000207887 1853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm9195-201ENSMUST00000208955 8870 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Vmn1r45-206ENSMUST00000227977 3297 ntAPPRIS P1 BASIC9.14□□□□□ -0.95
Lmo4P61969 Nemp1-203ENSMUST00000118728 2362 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Serpina1b-202ENSMUST00000164454 1760 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Gm18806-201ENSMUST00000207607 1775 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Pink1-202ENSMUST00000105816 1465 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 4930558J22Rik-201ENSMUST00000139822 1480 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Smok4a-201ENSMUST00000074512 1455 ntBASIC9.14□□□□□ -0.95
Lmo4P61969 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Cer1-201ENSMUST00000048430 1739 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Pik3r1-202ENSMUST00000055518 7113 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Ap5s1-201ENSMUST00000089506 1432 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Lmo4P61969 Zfp423-201ENSMUST00000052250 4510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm11525-201ENSMUST00000134436 2804 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Tubd1-203ENSMUST00000108030 1964 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 2810407A14Rik-201ENSMUST00000069809 1699 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm43127-201ENSMUST00000195890 2789 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Gm5822-201ENSMUST00000161562 1378 ntBASIC9.13□□□□□ -0.95
Lmo4P61969 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Lmo4P61969 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC9.13□□□□□ -0.95
Lmo4P61969 Stim1-209ENSMUST00000211457 2183 ntTSL 5 BASIC9.13□□□□□ -0.95
Lmo4P61969 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Lmo4P61969 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Ttc7-202ENSMUST00000125875 3917 ntTSL 2 BASIC9.13□□□□□ -0.95
Lmo4P61969 Igtp-203ENSMUST00000168280 1832 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Lgals12-201ENSMUST00000079902 2590 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Tmem168-206ENSMUST00000149123 3337 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Gm11554-201ENSMUST00000105056 890 ntAPPRIS P1 BASIC9.13□□□□□ -0.95
Lmo4P61969 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Rmdn1-202ENSMUST00000108253 806 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Rpl15-204ENSMUST00000112598 802 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Lmo4P61969 Vmn1r-ps104-201ENSMUST00000120960 771 ntBASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 48.5 ms