Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm5705-201ENSMUST00000066241 711 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Nfic-203ENSMUST00000105321 6237 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gpd1-201ENSMUST00000023760 2861 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Anxa7-201ENSMUST00000065504 2851 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm10782-202ENSMUST00000223775 1480 ntBASIC10.09□□□□□ -0.79
Sf3b6P59708 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Ncf4-201ENSMUST00000096357 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Tnip1-206ENSMUST00000108889 2834 ntAPPRIS P3 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Mybpc3-203ENSMUST00000169776 4163 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Cln3-204ENSMUST00000116269 2487 ntAPPRIS P2 TSL 5 BASIC10.09□□□□□ -0.79
Sf3b6P59708 Tgfb1i1-201ENSMUST00000070656 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 2810006K23Rik-201ENSMUST00000077376 1677 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gm10684-201ENSMUST00000098827 2203 ntTSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Gabre-201ENSMUST00000064780 4306 ntAPPRIS P1 TSL 1 (best) BASIC10.09□□□□□ -0.79
Sf3b6P59708 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Sh3d21-201ENSMUST00000094760 1859 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Spg20-203ENSMUST00000117341 2957 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Atcayos-203ENSMUST00000150782 3057 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Prx-202ENSMUST00000098644 4841 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm44190-201ENSMUST00000205083 1401 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Slc37a4-201ENSMUST00000165839 2086 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Acsm2-202ENSMUST00000098084 2099 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Qtrt2-201ENSMUST00000023387 2838 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm38357-201ENSMUST00000195382 2464 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm5703-201ENSMUST00000186658 3973 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Tmcc2-201ENSMUST00000045473 3410 ntAPPRIS P3 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Zfp37-206ENSMUST00000222050 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Rpl11-201ENSMUST00000102536 833 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Ighv1-58-201ENSMUST00000103529 351 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm11573-201ENSMUST00000119956 394 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm14126-201ENSMUST00000122345 395 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Sox5it-201ENSMUST00000144026 1207 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm15276-201ENSMUST00000145953 498 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 C8g-201ENSMUST00000015227 822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm20495-201ENSMUST00000173902 235 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm37259-201ENSMUST00000193903 849 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm37388-201ENSMUST00000193984 429 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC10.08□□□□□ -0.8
Sf3b6P59708 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm13097-201ENSMUST00000210722 397 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm18615-201ENSMUST00000222919 1031 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 CT010486.3-201ENSMUST00000224555 811 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 BC048507-201ENSMUST00000078471 600 ntAPPRIS P1 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Bnc2-202ENSMUST00000107198 3948 ntAPPRIS ALT2 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 A530053M12Rik-201ENSMUST00000187918 1467 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC10.08□□□□□ -0.8
Sf3b6P59708 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Nfkbiz-202ENSMUST00000096026 4067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Gm5532-201ENSMUST00000097531 1751 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 AA474408-201ENSMUST00000098110 3339 ntBASIC10.08□□□□□ -0.8
Sf3b6P59708 Ntng1-211ENSMUST00000156177 4652 ntTSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Zfp932-203ENSMUST00000112540 2081 ntAPPRIS P2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Ttll1-201ENSMUST00000016897 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Il10ra-202ENSMUST00000176222 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Rasgrp4-213ENSMUST00000204845 3182 ntTSL 5 BASIC10.08□□□□□ -0.8
Sf3b6P59708 Tmem88b-201ENSMUST00000097742 3471 ntAPPRIS P1 TSL 1 (best) BASIC10.08□□□□□ -0.8
Sf3b6P59708 Susd3-201ENSMUST00000021816 1317 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Cldn19-202ENSMUST00000094823 4168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 AC174797.1-201ENSMUST00000224339 1649 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Fam180a-201ENSMUST00000051176 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Fbxo39-201ENSMUST00000108504 1708 ntAPPRIS P1 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Il34-201ENSMUST00000076846 1709 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 C530005A16Rik-201ENSMUST00000142815 2436 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm15674-201ENSMUST00000143266 2438 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Mier1-204ENSMUST00000106857 4752 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Nsd3-206ENSMUST00000142395 10105 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 Palb2-204ENSMUST00000106469 2559 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Clp1-203ENSMUST00000165219 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Cfap100-207ENSMUST00000165673 2072 ntAPPRIS P2 TSL 5 BASIC10.07□□□□□ -0.8
Sf3b6P59708 AC127597.1-201ENSMUST00000225697 5711 ntBASIC10.07□□□□□ -0.8
Sf3b6P59708 Fcamr-202ENSMUST00000112477 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Scamp1-203ENSMUST00000152555 1877 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gcsam-202ENSMUST00000161347 1796 ntAPPRIS ALT2 TSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Gm15997-201ENSMUST00000202188 1491 ntTSL 1 (best) BASIC10.07□□□□□ -0.8
Sf3b6P59708 Hsd17b6-203ENSMUST00000219447 1459 ntAPPRIS P1 TSL 1 (best) BASIC10.07□□□□□ -0.8
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms