Protein–RNA interactions for Protein: P51680

Ccr4, C-C chemokine receptor type 4, mousemouse

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccr4P51680 Gm6605-201ENSMUST00000031488 2574 ntBASIC10.5□□□□□ -0.73
Ccr4P51680 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Tex2-202ENSMUST00000103070 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Spats2l-211ENSMUST00000169772 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Pxdn-208ENSMUST00000220271 6377 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccr4P51680 Tnk2-204ENSMUST00000115123 4225 ntAPPRIS P1 TSL 5 BASIC10.5□□□□□ -0.73
Ccr4P51680 Vtn-201ENSMUST00000017488 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Gm807-201ENSMUST00000181742 1723 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Hjurp-201ENSMUST00000054674 4878 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 F10-205ENSMUST00000152034 1449 ntTSL 5 BASIC10.5□□□□□ -0.73
Ccr4P51680 Gm39168-201ENSMUST00000210181 1423 ntTSL 1 (best) BASIC10.5□□□□□ -0.73
Ccr4P51680 Pard3-213ENSMUST00000160766 4949 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Ccr4P51680 Pml-202ENSMUST00000114136 4343 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Piwil1-201ENSMUST00000086056 4016 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Traf3ip3-201ENSMUST00000043550 2122 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccr4P51680 Slc46a2-201ENSMUST00000030081 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Gm44663-201ENSMUST00000206898 3150 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Muc3-201ENSMUST00000041226 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Msh3-202ENSMUST00000185852 3946 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Pcdhga1-201ENSMUST00000194190 4692 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Gm37122-201ENSMUST00000195313 1567 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Gpm6b-209ENSMUST00000112235 4480 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Cacna1c-202ENSMUST00000078320 8062 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Rapgef3-205ENSMUST00000129223 3750 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Zfyve26-203ENSMUST00000218377 2726 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccr4P51680 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Ccr4P51680 Gm15566-201ENSMUST00000121130 590 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm20495-201ENSMUST00000173902 235 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC10.49□□□□□ -0.73
Ccr4P51680 Gapdh-ps14-201ENSMUST00000183246 1002 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm27552-201ENSMUST00000183351 62 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm27844-201ENSMUST00000183613 62 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Mir6927-201ENSMUST00000184494 71 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm29499-201ENSMUST00000189151 486 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm28329-201ENSMUST00000191208 689 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm29171-201ENSMUST00000191397 486 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Ighv1-48-201ENSMUST00000191795 294 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC10.49□□□□□ -0.73
Ccr4P51680 3110031N09Rik-201ENSMUST00000201115 326 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm18056-201ENSMUST00000207670 568 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm18061-201ENSMUST00000208350 562 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm18063-201ENSMUST00000208529 568 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm18052-201ENSMUST00000208750 559 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm6867-201ENSMUST00000219165 425 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Gm6722-201ENSMUST00000221586 390 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Ntng1-201ENSMUST00000051253 327 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Lrmda-201ENSMUST00000075639 908 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Slc45a4-207ENSMUST00000151288 7509 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Mcf2l-217ENSMUST00000145067 5313 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Pou2f1-202ENSMUST00000069609 2402 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 1700019D03Rik-201ENSMUST00000050567 3641 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Dmbx1-203ENSMUST00000124071 4017 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Zfp558-202ENSMUST00000034647 1701 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ccr4P51680 Atxn1-201ENSMUST00000091628 10569 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Knop1-202ENSMUST00000063607 4884 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Gm29295-201ENSMUST00000190004 1371 ntTSL 5 BASIC10.49□□□□□ -0.73
Ccr4P51680 Gm7993-201ENSMUST00000200970 1384 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Cdca2-207ENSMUST00000163100 3841 ntAPPRIS P1 TSL 5 BASIC10.49□□□□□ -0.73
Ccr4P51680 Idi1-201ENSMUST00000169314 3027 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 AC167565.1-201ENSMUST00000226980 1833 ntBASIC10.49□□□□□ -0.73
Ccr4P51680 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Fam189b-201ENSMUST00000041913 3083 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Tmcc2-203ENSMUST00000132435 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Dph6-203ENSMUST00000102542 2734 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Bad-201ENSMUST00000025910 1451 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Myh9-201ENSMUST00000016771 7433 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Ccr4P51680 Pip5k1a-206ENSMUST00000107236 3618 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Serpina1f-202ENSMUST00000117053 2830 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Cnga4-202ENSMUST00000210344 1977 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Aldh3a2-201ENSMUST00000066277 2892 ntTSL 2 BASIC10.48□□□□□ -0.73
Ccr4P51680 Brat1-201ENSMUST00000041588 3333 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Pde2a-201ENSMUST00000163751 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.48□□□□□ -0.73
Ccr4P51680 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Ccr4P51680 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Inpp4a-203ENSMUST00000114933 3004 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Ablim2-206ENSMUST00000114206 3528 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccr4P51680 Acin1-203ENSMUST00000111484 4048 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Ccr4P51680 Arfgap1-202ENSMUST00000108859 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Papss1-205ENSMUST00000199878 2648 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Nfe2l1-203ENSMUST00000107658 4219 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Tpd52l2-202ENSMUST00000069712 1799 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Ppp6r3-201ENSMUST00000025846 4841 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Ccr4P51680 Ccdc163-202ENSMUST00000106462 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms