Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Tyw1-201ENSMUST00000040213 3044 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Akap5-203ENSMUST00000172992 2711 ntAPPRIS ALT2 TSL 3 BASIC11.98□□□□□ -0.49
Shmt1P50431 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC11.98□□□□□ -0.49
Shmt1P50431 Lrp12-201ENSMUST00000022916 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Wbp1l-204ENSMUST00000138302 3900 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Zfp93-201ENSMUST00000032696 2324 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Gm43061-201ENSMUST00000198850 2241 ntBASIC11.98□□□□□ -0.49
Shmt1P50431 Armt1-203ENSMUST00000118544 5044 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Shmt1P50431 Zfp410-215ENSMUST00000222832 1859 ntTSL 2 BASIC11.97□□□□□ -0.49
Shmt1P50431 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Kif1a-201ENSMUST00000086819 5097 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Stxbp5l-201ENSMUST00000023526 3344 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Slc19a1-201ENSMUST00000105410 2347 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm35040-201ENSMUST00000206829 5094 ntTSL 2 BASIC11.97□□□□□ -0.49
Shmt1P50431 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm9915-201ENSMUST00000066196 1383 ntBASIC11.97□□□□□ -0.49
Shmt1P50431 Gm13684-201ENSMUST00000152569 2264 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm2000-201ENSMUST00000102782 445 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shmt1P50431 Trgv2-201ENSMUST00000103563 491 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shmt1P50431 Snord17-201ENSMUST00000104526 238 ntBASIC11.97□□□□□ -0.49
Shmt1P50431 Eef1d-207ENSMUST00000116440 896 ntAPPRIS ALT2 TSL 3 BASIC11.97□□□□□ -0.49
Shmt1P50431 Olfr1267-ps1-201ENSMUST00000118957 930 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm15619-201ENSMUST00000128415 1294 ntTSL 3 BASIC11.97□□□□□ -0.49
Shmt1P50431 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm11642-201ENSMUST00000150442 440 ntTSL 5 BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm14275-201ENSMUST00000152112 430 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Hsh2d-202ENSMUST00000165324 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm20400-201ENSMUST00000173695 665 ntTSL 3 BASIC11.97□□□□□ -0.49
Shmt1P50431 Iqcf3-202ENSMUST00000186668 633 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm42518-201ENSMUST00000196277 938 ntBASIC11.97□□□□□ -0.49
Shmt1P50431 Gm30946-201ENSMUST00000198288 724 ntBASIC11.97□□□□□ -0.49
Shmt1P50431 Gm42953-201ENSMUST00000199363 581 ntTSL 3 BASIC11.97□□□□□ -0.49
Shmt1P50431 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC11.97□□□□□ -0.49
Shmt1P50431 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Dlk1-201ENSMUST00000056110 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Nrg1-202ENSMUST00000207417 3138 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Shmt1P50431 Ctnnbl1-201ENSMUST00000029178 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Fcho1-201ENSMUST00000093444 3073 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shmt1P50431 Rgs7bp-201ENSMUST00000063551 7077 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm10851-201ENSMUST00000192087 1685 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Gtf2i-210ENSMUST00000173341 4302 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Ffar2-201ENSMUST00000053156 2301 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Atp1a3-201ENSMUST00000080882 3621 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Shmt1P50431 Fam83a-202ENSMUST00000160942 2876 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Shmt1P50431 Gm37969-201ENSMUST00000195777 3409 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Rxrg-201ENSMUST00000015987 2110 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Nmnat1-203ENSMUST00000119921 2657 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Ugt1a7c-201ENSMUST00000058237 3231 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm45897-201ENSMUST00000212679 1998 ntTSL 5 BASIC11.96□□□□□ -0.49
Shmt1P50431 Pde4c-207ENSMUST00000224874 3099 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Shmt1P50431 4833422M21Rik-203ENSMUST00000181747 1365 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 5830437K03Rik-201ENSMUST00000199219 1379 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Gpcpd1-204ENSMUST00000110136 3546 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Sp4-201ENSMUST00000026367 5694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Haus6-201ENSMUST00000070607 6158 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Akap3-202ENSMUST00000202574 2879 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm10848-201ENSMUST00000192361 1811 ntTSL 2 BASIC11.96□□□□□ -0.49
Shmt1P50431 Sema6d-207ENSMUST00000103240 4372 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Rai1-203ENSMUST00000102688 6921 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Shmt1P50431 Krtap4-6-201ENSMUST00000100476 918 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Shmt1P50431 Clic3-201ENSMUST00000102918 791 ntAPPRIS ALT1 TSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Trmt10b-202ENSMUST00000107800 983 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Shmt1P50431 Pcnp-203ENSMUST00000119981 901 ntTSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm11675-201ENSMUST00000121873 832 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Treml4-202ENSMUST00000125426 992 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm20420-201ENSMUST00000173178 639 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Gstt3-203ENSMUST00000173537 687 ntTSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm17709-201ENSMUST00000174536 1096 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Tlx1-202ENSMUST00000174617 806 ntTSL 5 BASIC11.96□□□□□ -0.49
Shmt1P50431 4930535L15Rik-201ENSMUST00000175891 536 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm20714-202ENSMUST00000176436 748 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm27232-201ENSMUST00000184373 597 ntTSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Mrip-ps-201ENSMUST00000184613 940 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Eef1b2-209ENSMUST00000188524 681 ntTSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm35025-203ENSMUST00000193519 634 ntTSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm43458-201ENSMUST00000200791 462 ntTSL 3 BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm5599-201ENSMUST00000209602 788 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Gm45594-201ENSMUST00000211717 241 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Mt1-202ENSMUST00000211807 1085 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 AC122346.3-201ENSMUST00000223983 306 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 CT025551.1-201ENSMUST00000223996 692 ntBASIC11.96□□□□□ -0.49
Shmt1P50431 Sst-201ENSMUST00000004480 599 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Shmt1P50431 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Shmt1P50431 Rnf180-205ENSMUST00000226044 3279 ntAPPRIS ALT2 BASIC11.96□□□□□ -0.49
Shmt1P50431 4930484H19Rik-201ENSMUST00000218870 1737 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 50.6 ms