Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Arvcf-203ENSMUST00000115612 4218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Zfat-205ENSMUST00000162173 3561 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Trpv1-203ENSMUST00000108470 2667 ntTSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Rufy2-203ENSMUST00000122231 2664 ntTSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Tgoln1-201ENSMUST00000070524 5013 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Tcte1-201ENSMUST00000113547 3074 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Tmem30c-202ENSMUST00000119407 1396 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SftpbP50405 Gfra2-201ENSMUST00000022699 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Nap1l3-201ENSMUST00000079490 2837 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SftpbP50405 March1-207ENSMUST00000110258 2581 ntAPPRIS ALT1 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Rab3gap2-201ENSMUST00000069652 7052 ntAPPRIS P2 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Ptp4a3-203ENSMUST00000165541 3539 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC11.57□□□□□ -0.56
SftpbP50405 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SftpbP50405 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Pafah1b3-202ENSMUST00000108410 689 ntTSL 3 BASIC11.57□□□□□ -0.56
SftpbP50405 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 9430093N23Rik-201ENSMUST00000152494 515 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Gm5714-201ENSMUST00000197343 566 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Gm6653-201ENSMUST00000218063 1288 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Rpl17-ps3-201ENSMUST00000221295 556 ntBASIC11.57□□□□□ -0.56
SftpbP50405 AC102569.1-201ENSMUST00000221563 685 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Gm9899-201ENSMUST00000065519 555 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Ubxn10-201ENSMUST00000105809 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 4930432K21Rik-202ENSMUST00000118856 2366 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 AC125374.1-201ENSMUST00000213573 1400 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Cyb5r3-202ENSMUST00000162178 2547 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Ccm2-202ENSMUST00000109721 1551 ntTSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Gm4419-201ENSMUST00000180671 1729 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Apon-202ENSMUST00000218722 1747 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
SftpbP50405 Smim1-214ENSMUST00000182191 3535 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Piezo2-202ENSMUST00000047480 10724 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Dhdds-201ENSMUST00000012262 3133 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Plin2-201ENSMUST00000000466 1888 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Gm13812-201ENSMUST00000118061 1347 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Gm13810-201ENSMUST00000118584 1347 ntBASIC11.57□□□□□ -0.56
SftpbP50405 Rps6ka6-204ENSMUST00000113428 4135 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
SftpbP50405 Syt11-203ENSMUST00000107505 5020 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
SftpbP50405 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Gm45416-201ENSMUST00000209713 2201 ntBASIC11.56□□□□□ -0.56
SftpbP50405 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Tnfaip8l3-201ENSMUST00000098760 4403 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Slit2-202ENSMUST00000170109 7758 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 Slit2-217ENSMUST00000174421 7785 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Furin-202ENSMUST00000120753 4332 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 Mknk1-202ENSMUST00000106513 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
SftpbP50405 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Rps10-202ENSMUST00000114881 604 ntAPPRIS P1 TSL 3 BASIC11.56□□□□□ -0.56
SftpbP50405 Pqbp1-203ENSMUST00000115655 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Gm14130-201ENSMUST00000118417 987 ntBASIC11.56□□□□□ -0.56
SftpbP50405 Gm11651-201ENSMUST00000130673 529 ntTSL 3 BASIC11.56□□□□□ -0.56
SftpbP50405 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 9130204K15Rik-202ENSMUST00000150312 696 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Pla2g6-203ENSMUST00000172403 2943 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Gm8815-201ENSMUST00000173809 620 ntBASIC11.56□□□□□ -0.56
SftpbP50405 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Park2-204ENSMUST00000179624 1108 ntTSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 Gm29245-201ENSMUST00000187332 1416 ntBASIC11.56□□□□□ -0.56
SftpbP50405 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC11.56□□□□□ -0.56
SftpbP50405 Gm45331-201ENSMUST00000209868 554 ntBASIC11.56□□□□□ -0.56
SftpbP50405 Plek2-201ENSMUST00000021544 1583 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Mrrf-201ENSMUST00000028250 2623 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Ipo4-201ENSMUST00000047131 3846 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Slc17a5-201ENSMUST00000052441 3236 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Psg23-201ENSMUST00000057810 2179 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Zfp420-202ENSMUST00000074876 2537 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Asb15-201ENSMUST00000031696 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Slc10a3-203ENSMUST00000114146 1902 ntAPPRIS P2 TSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 Mirg-201ENSMUST00000181496 1906 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Nup210-202ENSMUST00000113509 6893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Cacna1c-224ENSMUST00000219018 7516 ntTSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 Gm15622-201ENSMUST00000143025 1464 ntTSL 5 BASIC11.56□□□□□ -0.56
SftpbP50405 4930588G17Rik-201ENSMUST00000208075 1474 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Slc4a8-204ENSMUST00000162049 3532 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 Zfp174-201ENSMUST00000041778 5897 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
SftpbP50405 AI854703-201ENSMUST00000095938 3517 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
SftpbP50405 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
SftpbP50405 Odf2-209ENSMUST00000113764 2450 ntAPPRIS P3 TSL 5 BASIC11.55□□□□□ -0.56
SftpbP50405 Slc35a4-201ENSMUST00000036158 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Lingo1-201ENSMUST00000053568 3295 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Slc25a51-201ENSMUST00000107796 4433 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Pcsk9-201ENSMUST00000049507 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Gm3716-202ENSMUST00000198582 2879 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Pigh-203ENSMUST00000217998 2868 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Ndor1-201ENSMUST00000100329 4517 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SftpbP50405 Gm42641-202ENSMUST00000160217 4248 ntAPPRIS P5 TSL 2 BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms