Protein–RNA interactions for Protein: P46935

Nedd4, E3 ubiquitin-protein ligase NEDD4, mousemouse

Known RBP Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd4P46935 Syk-202ENSMUST00000118756 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Hist1h2be-201ENSMUST00000051091 2506 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Wfdc8-202ENSMUST00000109338 1794 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 3830406C13Rik-209ENSMUST00000224389 2444 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nedd4P46935 Cr1l-201ENSMUST00000075451 1651 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Nedd4P46935 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nedd4P46935 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Cbfa2t2-202ENSMUST00000099178 3247 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Ube2v1-202ENSMUST00000109207 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Drc1-201ENSMUST00000101448 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Cryzl1-202ENSMUST00000114023 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm12028-201ENSMUST00000118065 436 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Cryzl1-206ENSMUST00000124282 1187 ntTSL 5 BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm6471-202ENSMUST00000148734 587 ntTSL 2 BASIC13.63□□□□□ -0.23
Nedd4P46935 2210406O10Rik-203ENSMUST00000149687 1198 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 2410124H12Rik-201ENSMUST00000160494 706 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Prr3-206ENSMUST00000173585 770 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
Nedd4P46935 Stard6-206ENSMUST00000174118 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm4858-201ENSMUST00000179064 735 ntTSL 5 BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm26626-201ENSMUST00000180989 713 ntTSL 2 BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm6216-201ENSMUST00000182390 687 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Gm18552-201ENSMUST00000187425 538 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Gm43564-201ENSMUST00000196185 211 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 AC124613.1-201ENSMUST00000198711 88 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Gm42689-201ENSMUST00000202403 404 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Mylpf-206ENSMUST00000206772 653 ntTSL 3 BASIC13.63□□□□□ -0.23
Nedd4P46935 4933407I05Rik-202ENSMUST00000213467 420 ntTSL 2 BASIC13.63□□□□□ -0.23
Nedd4P46935 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Kalrn-211ENSMUST00000114966 3857 ntTSL 5 BASIC13.63□□□□□ -0.23
Nedd4P46935 BC017643-201ENSMUST00000038709 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Ankrd42-201ENSMUST00000056106 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Dync1i1-202ENSMUST00000115555 2669 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm5171-201ENSMUST00000214944 1415 ntBASIC13.63□□□□□ -0.23
Nedd4P46935 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Pxylp1-201ENSMUST00000078478 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Fhl1-202ENSMUST00000114768 1337 ntTSL 5 BASIC13.63□□□□□ -0.23
Nedd4P46935 Sertad3-201ENSMUST00000068641 1329 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Hcls1-201ENSMUST00000023531 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nedd4P46935 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Cog3-203ENSMUST00000227473 4197 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Micu1-212ENSMUST00000179709 1814 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Pparg-204ENSMUST00000203732 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 1810019N24Rik-201ENSMUST00000181128 1474 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.62□□□□□ -0.23
Nedd4P46935 Mgl2-205ENSMUST00000165951 1635 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm13426-201ENSMUST00000117887 795 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Spata3-210ENSMUST00000153247 884 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm5210-201ENSMUST00000182150 1010 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 2810049E08Rik-201ENSMUST00000185600 1102 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 4930477O15Rik-201ENSMUST00000196484 1089 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Gm6370-202ENSMUST00000198912 1017 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm31520-203ENSMUST00000204874 647 ntTSL 3 BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm44640-201ENSMUST00000206894 247 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm5650-201ENSMUST00000209641 598 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Cysrt1-201ENSMUST00000043379 873 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Olfr1394-201ENSMUST00000052668 939 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nedd4P46935 Gm5278-201ENSMUST00000055957 552 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Gm10228-201ENSMUST00000089105 532 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Nedd4P46935 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Phykpl-206ENSMUST00000167797 3116 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Tti2-202ENSMUST00000209851 3133 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 CT010480.4-201ENSMUST00000224654 2283 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 AC117194.1-201ENSMUST00000224847 3002 ntBASIC13.62□□□□□ -0.23
Nedd4P46935 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC13.62□□□□□ -0.23
Nedd4P46935 A230009B12Rik-202ENSMUST00000159602 1810 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Spdye4a-201ENSMUST00000085733 1819 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Nedd4P46935 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 Slc25a13-203ENSMUST00000188414 3121 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nedd4P46935 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd4P46935 Gm37651-201ENSMUST00000194679 1494 ntBASIC13.61□□□□□ -0.23
Nedd4P46935 Trh-201ENSMUST00000006046 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd4P46935 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd4P46935 Ptprm-203ENSMUST00000224091 3773 ntBASIC13.61□□□□□ -0.23
Nedd4P46935 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd4P46935 Tmprss3-201ENSMUST00000024833 2731 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd4P46935 Arhgap19-204ENSMUST00000177495 1652 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nedd4P46935 Blvra-202ENSMUST00000110389 657 ntTSL 3 BASIC13.61□□□□□ -0.23
Nedd4P46935 Gm12947-201ENSMUST00000116114 420 ntBASIC13.61□□□□□ -0.23
Nedd4P46935 Gm11540-201ENSMUST00000117457 780 ntBASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms