Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Lrp8-203ENSMUST00000106732 2648 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Slc25a21-202ENSMUST00000110680 918 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Gm12950-201ENSMUST00000121683 417 ntBASIC11.65□□□□□ -0.54
HttP42859 Pabpn1-203ENSMUST00000139985 903 ntAPPRIS ALT2 TSL 2 BASIC11.65□□□□□ -0.54
HttP42859 Rian-210ENSMUST00000182689 295 ntTSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Olfr1227-ps1-201ENSMUST00000215627 928 ntBASIC11.65□□□□□ -0.54
HttP42859 Gm18165-201ENSMUST00000217426 928 ntBASIC11.65□□□□□ -0.54
HttP42859 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Elmod3-204ENSMUST00000141833 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Dcstamp-201ENSMUST00000022913 1997 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Rtp4-202ENSMUST00000209422 1859 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
HttP42859 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
HttP42859 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
HttP42859 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HttP42859 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
HttP42859 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Enc1-201ENSMUST00000041623 4737 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Zfp740-205ENSMUST00000121206 795 ntTSL 3 BASIC11.64□□□□□ -0.55
HttP42859 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Clpsl2-201ENSMUST00000025061 442 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Wdr75-201ENSMUST00000027139 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Dnm2-206ENSMUST00000172482 2613 ntAPPRIS P4 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Bcar1-203ENSMUST00000212349 3116 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Stra6-213ENSMUST00000167479 2871 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Sh2d2a-202ENSMUST00000107581 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Tuft1-204ENSMUST00000196733 2555 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 4930538E20Rik-201ENSMUST00000131383 546 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Gm16268-201ENSMUST00000159445 1157 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Bud31-203ENSMUST00000160075 928 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
HttP42859 Gm3383-203ENSMUST00000178414 780 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Gm3194-201ENSMUST00000180143 780 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 AC161172.1-201ENSMUST00000227801 486 ntBASIC11.64□□□□□ -0.55
HttP42859 Cenph-201ENSMUST00000075550 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Gm43362-201ENSMUST00000198192 2470 ntBASIC11.64□□□□□ -0.55
HttP42859 Gpr155-203ENSMUST00000112043 3284 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.64□□□□□ -0.55
HttP42859 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 4931428F04Rik-202ENSMUST00000171788 3552 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
HttP42859 Spert-201ENSMUST00000035243 1430 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Rab7b-201ENSMUST00000064664 1672 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Apba2-201ENSMUST00000032732 3321 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Ppp3r1-201ENSMUST00000102880 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Masp2-202ENSMUST00000105701 738 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Gm11295-201ENSMUST00000121379 803 ntBASIC11.64□□□□□ -0.55
HttP42859 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC11.64□□□□□ -0.55
HttP42859 Gm16178-201ENSMUST00000129408 677 ntTSL 2 BASIC11.64□□□□□ -0.55
HttP42859 4930515B02Rik-201ENSMUST00000140588 591 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Gm16252-201ENSMUST00000144420 857 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Platr10-202ENSMUST00000191479 818 ntBASIC11.64□□□□□ -0.55
HttP42859 Gm42617-201ENSMUST00000197640 1229 ntBASIC11.64□□□□□ -0.55
HttP42859 Ndufc1-201ENSMUST00000038108 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Olfr418-201ENSMUST00000059754 991 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
HttP42859 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC11.64□□□□□ -0.55
HttP42859 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Gm31784-201ENSMUST00000209523 1053 ntTSL 5 BASIC11.63□□□□□ -0.55
HttP42859 Gm32856-202ENSMUST00000212180 1134 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Gzmf-201ENSMUST00000022757 919 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Myl10-201ENSMUST00000005611 688 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 1700022A22Rik-202ENSMUST00000187130 1458 ntTSL 5 BASIC11.63□□□□□ -0.55
HttP42859 1700048O20Rik-202ENSMUST00000214777 1900 ntTSL 3 BASIC11.63□□□□□ -0.55
HttP42859 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Slc35b3-201ENSMUST00000021870 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Prdx2-202ENSMUST00000109733 1590 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
HttP42859 Gm45871-204ENSMUST00000211710 2003 ntAPPRIS P1 TSL 3 BASIC11.63□□□□□ -0.55
HttP42859 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
HttP42859 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
HttP42859 Gm17033-201ENSMUST00000146663 593 ntTSL 3 BASIC11.63□□□□□ -0.55
HttP42859 Gm24368-201ENSMUST00000175388 106 ntBASIC11.63□□□□□ -0.55
HttP42859 Gm24180-201ENSMUST00000179961 110 ntBASIC11.63□□□□□ -0.55
HttP42859 Omt2b-203ENSMUST00000187667 727 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Ackr1-202ENSMUST00000194046 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
HttP42859 Pcdh7-207ENSMUST00000199310 659 ntTSL 2 BASIC11.63□□□□□ -0.55
HttP42859 AC156274.1-201ENSMUST00000219193 634 ntBASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms